RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 TEP1Q99973 2627 aaKnown RBP-1.18□□□□□ -2.6
RBM39-226ENST00000468086 DOPEY2Q9Y3R5 2298 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 STAB2Q8WWQ8 2551 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 TMEM189A5PLL7 270 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 IGKCP01834 107 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 PRM1P04553 51 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 BCL2P10415 239 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 FADDQ13158 208 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 PPP1R1CQ8WVI7 109 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 DGCR14Q96DF8 476 aaKnown RBP-1.18□□□□□ -2.6
RBM39-226ENST00000468086 BORCS8Q96FH0 119 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 GINS3Q9BRX5 216 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 NBEAL1Q6ZS30 2694 aa-1.18□□□□□ -2.6
RBM39-226ENST00000468086 SPAG17Q6Q759 2223 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 IFITM5A6NNB3 132 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 MAXP61244 160 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 RBM3P98179 157 aaKnown RBP-1.19□□□□□ -2.6
RBM39-226ENST00000468086 IQCJQ1A5X6 159 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 OR5H6Q8NGV6 325 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 OR13C6PQ8NH95 151 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 LRTM1Q9HBL6 345 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 F5P12259 2224 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 CSMD3Q7Z407 3707 aa-1.19□□□□□ -2.6
RBM39-226ENST00000468086 ALMS1Q8TCU4 4167 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 GVQW2A0A096LPI5 108 aaPredicted RBP-1.2□□□□□ -2.6
RBM39-226ENST00000468086 IL7P13232 177 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 EMX2Q04743 252 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 DEFB109BQ30KR1 87 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 TMEM141Q96I45 108 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 PRELID3AQ96N28 172 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 CYP4F30PQ9H0H9 118 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 SS18L2Q9UHA2 77 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 MAP2P11137 1827 aaKnown RBP-1.2□□□□□ -2.6
RBM39-226ENST00000468086 AFDNP55196 1824 aaKnown RBP-1.2□□□□□ -2.6
RBM39-226ENST00000468086 ANK1P16157 1881 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 TRPM7Q96QT4 1865 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 PIEZO2Q9H5I5 2752 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 CDK13Q14004 1512 aaKnown RBP-1.2□□□□□ -2.6
RBM39-226ENST00000468086 NINQ8N4C6 2090 aa-1.2□□□□□ -2.6
RBM39-226ENST00000468086 SPTBN2O15020 2390 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 EP300Q09472 2414 aaPredicted RBP-1.21□□□□□ -2.6
RBM39-226ENST00000468086 LOC107986453A0A1B0GWG9 222 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 IFNA1P01562 189 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 FABP2P12104 132 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 HSD11B1P28845 292 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 SDC4P31431 198 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 BET1LQ9NYM9 111 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 RREB1Q92766 1687 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 PKDREJQ9NTG1 2253 aa-1.21□□□□□ -2.6
RBM39-226ENST00000468086 LAMA2P24043 3122 aaKnown RBP-1.22□□□□□ -2.6
RBM39-226ENST00000468086 TCOF1Q13428 1488 aaKnown RBP-1.22□□□□□ -2.6
RBM39-226ENST00000468086 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.22□□□□□ -2.6
RBM39-226ENST00000468086 TRAV12-2A0A075B6T6 113 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 PYYP10082 97 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 GTF2A1P52655 376 aaPredicted RBP-1.22□□□□□ -2.6
RBM39-226ENST00000468086 LTC4SQ16873 150 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 CEP19Q96LK0 163 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 CARD19Q96LW7 228 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 DLC1Q96QB1 1528 aa-1.22□□□□□ -2.6
RBM39-226ENST00000468086 BIRC6Q9NR09 4857 aa-1.22□□□□□ -2.61
RBM39-226ENST00000468086 FLGP20930 4061 aaPredicted RBP-1.23□□□□□ -2.61
RBM39-226ENST00000468086 TEX49A0A1B0GTD5 131 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 CDC42EP2O14613 210 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 ELOF1P60002 83 aaKnown RBP-1.23□□□□□ -2.61
RBM39-226ENST00000468086 WFDC2Q14508 124 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 SMIM11BQ8TCY0 68 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 AP3S1Q92572 193 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 NUBP2Q9Y5Y2 271 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 HECTD1Q9ULT8 2610 aa-1.23□□□□□ -2.61
RBM39-226ENST00000468086 MFSD11O43934 449 aa-1.24□□□□□ -2.61
RBM39-226ENST00000468086 EDF1O60869 148 aaKnown RBP-1.24□□□□□ -2.61
RBM39-226ENST00000468086 APODP05090 189 aa-1.24□□□□□ -2.61
RBM39-226ENST00000468086 MRPS25P82663 173 aaKnown RBP-1.24□□□□□ -2.61
RBM39-226ENST00000468086 OR5A2Q8NGI9 324 aa-1.24□□□□□ -2.61
RBM39-226ENST00000468086 FKBP11Q9NYL4 201 aa-1.24□□□□□ -2.61
RBM39-226ENST00000468086 USP9YO00507 2555 aaPredicted RBP-1.24□□□□□ -2.61
RBM39-226ENST00000468086 FLNBO75369 2602 aaKnown RBP-1.24□□□□□ -2.61
RBM39-226ENST00000468086 MAP1BP46821 2468 aaKnown RBP-1.25□□□□□ -2.61
RBM39-226ENST00000468086 BSNQ9UPA5 3926 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 TRAV17A0A0B4J275 112 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 TRDV1A0A1B0GX56 115 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 ARF6P62330 175 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 SMIM7Q9BQ49 75 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 VWFP04275 2813 aa-1.25□□□□□ -2.61
RBM39-226ENST00000468086 M0R3E3 92 aa-1.26□□□□□ -2.61
RBM39-226ENST00000468086 APOC1P02654 83 aa-1.26□□□□□ -2.61
RBM39-226ENST00000468086 RPL19P84098 196 aaKnown RBP-1.26□□□□□ -2.61
RBM39-226ENST00000468086 UNQ5815/PRO19632Q6UWF5 114 aa-1.26□□□□□ -2.61
RBM39-226ENST00000468086 TECPR2O15040 1411 aa-1.26□□□□□ -2.61
RBM39-226ENST00000468086 CHD6Q8TD26 2715 aa-1.26□□□□□ -2.61
RBM39-226ENST00000468086 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.26□□□□□ -2.61
RBM39-226ENST00000468086 SVEP1Q4LDE5 3571 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 TRBV27A0A0K0K1C4 114 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 S100A6P06703 90 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 SDC2P34741 201 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 DLEC1Q9Y238 1755 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 TGP01266 2768 aa-1.27□□□□□ -2.61
RBM39-226ENST00000468086 TNS1Q9HBL0 1735 aaKnown RBP-1.28□□□□□ -2.61
RBM39-226ENST00000468086 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms