RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CDC42BPGQ6DT37 1551 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 PHRF1Q9P1Y6 1649 aaKnown RBP1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 KIF1AQ12756 1690 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 LRRIQ1Q96JM4 1722 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 ABCA3Q99758 1704 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 VIRMAQ69YN4 1812 aaKnown RBP1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 FABP4P15090 132 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 NDUFA6P56556 154 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 B2MP61769 119 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 VMA21Q3ZAQ7 101 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 DEFB123Q8N688 67 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 CCL4L1Q8NHW4 92 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 OR4C12Q96R67 309 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 CPDO75976 1380 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 BCL9O00512 1426 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 DAPK1P53355 1430 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 PPIP5K1Q6PFW1 1433 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 ANKARQ7Z5J8 1434 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 NSD3Q9BZ95 1437 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 ANKRD50Q9ULJ7 1429 aa1.04□□□□□ -2.24
GAPVD1-211ENST00000467707 PARP4Q9UKK3 1724 aaKnown RBP1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 SBF2Q86WG5 1849 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 A0A1B0GV72 72 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 A0A1W2PRE2 83 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 FABP2P12104 132 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 SDC2P34741 201 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 DIAPH2-AS1Q14236 149 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 LINC00269Q8N2A0 174 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 SMPXQ9UHP9 88 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 ANKRD36BQ8N2N9 1353 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 LRRC37A3O60309 1634 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 CLTCL1P53675 1640 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 PAPPAQ13219 1627 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 NRXN3Q9Y4C0 1643 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 ITSN1Q15811 1721 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 PKD1L3Q7Z443 1732 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 RGPD3A6NKT7 1758 aaPredicted RBP1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 RGPD4Q7Z3J3 1758 aa1.03□□□□□ -2.24
GAPVD1-211ENST00000467707 GABARAPH6UMI1 98 aa1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 BRCA2P51587 3418 aa1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 N4BP2Q86UW6 1770 aaPredicted RBP1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 TNRC6CQ9HCJ0 1690 aaKnown RBP1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 LAMA2P24043 3122 aaKnown RBP1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 PRUNE2Q8WUY3 3088 aa1.02□□□□□ -2.25
GAPVD1-211ENST00000467707 LAMA4Q16363 1823 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 COL24A1Q17RW2 1714 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 NHSQ6T4R5 1651 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 IQGAP3Q86VI3 1631 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 ABCC6O95255 1503 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 CPSF1Q10570 1443 aaKnown RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 TRAV23DV6A0A075B6W5 121 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 A0A0J9YY99 117 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 FABP1P07148 127 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 TFAMQ00059 246 aaKnown RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 GLIPR1L1Q6UWM5 242 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 GRPEL2Q8TAA5 225 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 BOKQ9UMX3 212 aaPredicted RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 MUC3AQ02505 3323 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 CENPFP49454 3210 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 RANBP2P49792 3224 aaKnown RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 SPTBN5Q9NRC6 3674 aaKnown RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 BTAF1O14981 1849 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 RGPD8O14715 1765 aaPredicted RBP1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 AKAP12Q02952 1782 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 SCN11AQ9UI33 1791 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 UNC79Q9P2D8 2635 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 KIAA1551Q9HCM1 1747 aa1.01□□□□□ -2.25
GAPVD1-211ENST00000467707 ALS2Q96Q42 1657 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 QRICH2Q9H0J4 1663 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 LAMA3Q16787 3333 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 MYLKQ15746 1914 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 C5orf58C9J3I9 102 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 H7BYZ3 331 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 TRACP01848 142 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 S100A11P31949 105 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 SRP9P49458 86 aaKnown RBP1□□□□□ -2.25
GAPVD1-211ENST00000467707 OR5H6Q8NGV6 325 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 OR5AK2Q8NH90 309 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 PAPPA2Q9BXP8 1791 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 KNDC1Q76NI1 1749 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 TIAM2Q8IVF5 1701 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 IFT172Q9UG01 1749 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 LMO7Q8WWI1 1683 aa1□□□□□ -2.25
GAPVD1-211ENST00000467707 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 SMG6Q86US8 1419 aaKnown RBP0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 VPS8Q8N3P4 1428 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 MGAMO43451 1857 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 KTN1Q86UP2 1357 aaKnown RBP0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 HTTP42858 3142 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 C4AP0C0L4 1744 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 C4BP0C0L5 1744 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 CRYBG1Q9Y4K1 1723 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 LOC105371267A0A1B0GV96 52 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 TOMM20LQ6UXN7 152 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 THEM6Q8WUY1 208 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 PRELID3AQ96N28 172 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 LXNQ9BS40 222 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 C5P01031 1676 aa0.99□□□□□ -2.25
GAPVD1-211ENST00000467707 ALPK3Q96L96 1907 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms