RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 XCL2Q9UBD3 114 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 IGHV3-49A0A0A0MS15 119 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 SMIM31A0A1B0GVY4 71 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 KNCNA6PVL3 124 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 PMS2P5A8MQ11 134 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 F6UB75 175 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 H3BMM0 161 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 UPK2O00526 184 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 SMR3BP02814 79 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF688P0C7X2 276 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 CXCL3P19876 107 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 TAS2R30P59541 319 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 SNRPD3P62318 126 aaKnown RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 RPL30P62888 115 aaKnown RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 WT1-ASQ06250 92 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 EIF4EBP1Q13541 118 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 Q6ZRN7 208 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 OR51G1Q8NGK1 321 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 OR6F1Q8NGZ6 308 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 LSM10Q969L4 123 aaKnown RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 ACY3Q96HD9 319 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 RNASE7Q9H1E1 156 aaKnown RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 SDF2L1Q9HCN8 221 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 NDUFA4L2Q9NRX3 87 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 SSR3Q9UNL2 185 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 POMPQ9Y244 141 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 AP4S1Q9Y587 144 aa3.72□□□□□ -1.81
PTCD3-207ENST00000467273 YTHDF2Q9Y5A9 579 aaKnown RBP3.72□□□□□ -1.81
PTCD3-207ENST00000467273 IGHV3OR16-13A0A075B7E8 117 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 IGHV3-74A0A0B4J1X5 117 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 FAM236DA0A1B0GTK5 79 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 TEX50A0A1B0GTY4 177 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 A0A1B0GV50 99 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 LINC00862A6NCI5 91 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 CORTO00230 105 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 LALBAP00709 142 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 FAM236CP0DP71 79 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 HLA-DRB4P13762 266 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 ORM2P19652 201 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 CXCL2P19875 107 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 NPPCP23582 126 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 CRYBB3P26998 211 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 PFN2P35080 140 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 CTRLP40313 264 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 KRTAP10-1P60331 282 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 RRN3P1Q2M238 152 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 TMEM69Q5SWH9 247 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 SPATA31B1PQ5VZV4 182 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 LRRTM1Q86UE6 522 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 C9orf62Q8N4C0 152 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 OR5A1Q8NGJ0 315 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 BLNKQ8WV28 456 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 METTL26Q96S19 204 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 CST9LQ9H4G1 147 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 HLA-DRB4X5D2U9 266 aa3.71□□□□□ -1.82
PTCD3-207ENST00000467273 TRAV8-4A0A0B4J246 113 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 I3L2K1 104 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 SLC17A2O00624 439 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 P01737 135 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 ATP5G1P05496 136 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 RPL7P18124 248 aaKnown RBP3.7□□□□□ -1.82
PTCD3-207ENST00000467273 FGF7P21781 194 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 GADD45AP24522 165 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 SRIP30626 198 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 ATP5G3P48201 142 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 LINC00315P59091 139 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 CATR1Q13166 79 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 PSMG4Q5JS54 123 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 C12orf45Q8N5I9 185 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-207ENST00000467273 SLC35G3Q8N808 338 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 OR10R2Q8NGX6 335 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 PCNPQ8WW12 178 aaKnown RBP3.7□□□□□ -1.82
PTCD3-207ENST00000467273 MBD3L1Q8WWY6 194 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 SLC25A38Q96DW6 304 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 FMC1Q96HJ9 113 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 TP53RKQ96S44 253 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 NDFIP1Q9BT67 221 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 PBDC1Q9BVG4 233 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 FKBP11Q9NYL4 201 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
PTCD3-207ENST00000467273 VAX2Q9UIW0 290 aa3.7□□□□□ -1.82
PTCD3-207ENST00000467273 MRPS16Q9Y3D3 137 aaKnown RBP3.7□□□□□ -1.82
PTCD3-207ENST00000467273 IGHV3OR16-12A0A075B7B8 117 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 IGHV3-21A0A0B4J1V1 117 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 LOC100131303A0A0U1RQF7 123 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 H3BNG1 76 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 OR7C2O60412 319 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 UPK1BO75841 260 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 SCO1O75880 301 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 AZU1P20160 251 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 RAB3BP20337 219 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 ERVK-16P61578 105 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 HIST1H1AQ02539 215 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-207ENST00000467273 DHRS2Q13268 280 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 FCN2Q15485 313 aa3.69□□□□□ -1.82
PTCD3-207ENST00000467273 HIST1H2BAQ96A08 127 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms