RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 C5orf38Q86SI9 138 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 Q8N8P6 123 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 MGST2Q99735 147 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 MANBALQ9NQG1 85 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 SPAG17Q6Q759 2223 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 USP34Q70CQ2 3546 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 TRAV17A0A0B4J275 112 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 C9JCJ5 164 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 PRAC2D3DTV9 90 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 K7EQG2 157 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV4-39P01824 125 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 PRM2P04554 102 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
LRCH3-212ENST00000466845 INSL4Q14641 139 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF678Q5SXM1 525 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 TIFABQ6ZNK6 161 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 HMGN2P46Q86SG4 172 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF645Q8N7E2 425 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 CLDND2Q8NHS1 167 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 FLVCR1-AS1Q8TAF5 88 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 TSKUQ8WUA8 353 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 LINC01600Q96MT4 127 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 CST11Q9H112 138 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 Q9H3A6 140 aa4.09□□□□□ -1.75
LRCH3-212ENST00000466845 MED12LQ86YW9 2145 aa4.09□□□□□ -1.76
LRCH3-212ENST00000466845 CACNA1AO00555 2505 aa4.09□□□□□ -1.76
LRCH3-212ENST00000466845 C17orf58Q2M2W7 97 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 KRTAP24-1Q3LI83 254 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 SCXQ7RTU7 201 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 CYB561D1Q8N8Q1 229 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 SLC25A29Q8N8R3 303 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 AQP3Q92482 292 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 CFAP54Q96N23 3096 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 MYO15AQ9UKN7 3530 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 WDR87Q6ZQQ6 2873 aa4.08□□□□□ -1.76
LRCH3-212ENST00000466845 THADAQ6YHU6 1953 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 VPS13AQ96RL7 3174 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IGHV1-45A0A0A0MS14 117 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 A0A1W2PS18 150 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IBA57-AS1B1ANH7 110 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 SERF1AO75920 110 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 TSHBP01222 138 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 ASAH2BP0C7U1 165 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IGHV4-38-2P0DP08 117 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 COX8AP10176 69 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 CCL4P13236 92 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 S100A4P26447 101 aaKnown RBP4.07□□□□□ -1.76
LRCH3-212ENST00000466845 FGF12P61328 243 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 UBE2G1P62253 170 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 ZNF816Q0VGE8 651 aaPredicted RBP4.07□□□□□ -1.76
LRCH3-212ENST00000466845 TMEM61Q8N0U2 210 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 DEFB119Q8N690 84 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 ITLN1Q8WWA0 313 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 ITLN2Q8WWU7 325 aaPredicted RBP4.07□□□□□ -1.76
LRCH3-212ENST00000466845 NPCDR1Q9BY65 106 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 IL36BQ9NZH7 164 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 TP53TG3Q9ULZ0 132 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 NCOR2Q9Y618 2525 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 MYOFQ9NZM1 2061 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 EML5Q05BV3 1969 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 EXPH5Q8NEV8 1989 aa4.07□□□□□ -1.76
LRCH3-212ENST00000466845 SDK1Q7Z5N4 2213 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 DMDP11532 3685 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 TRBV6-7A0A0A0MS04 114 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 IGHV1OR15-9A0A0B4J2B8 117 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 IGHV3-38A0A0C4DH36 116 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 A6NN06 94 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 ZNF736B4DX44 427 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-212ENST00000466845 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 IGKV1-16P04430 117 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 PCBD1P61457 104 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 BLCAPP62952 87 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 CD177Q8N6Q3 437 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 SLC25A2Q9BXI2 301 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
LRCH3-212ENST00000466845 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 LY96Q9Y6Y9 160 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 SPTBN2O15020 2390 aa4.06□□□□□ -1.76
LRCH3-212ENST00000466845 TRGV8A0A0C4DH27 118 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 FAM72CH0Y354 149 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 CCKP06307 115 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 CISD3P0C7P0 127 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 ELK1P19419 428 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 MDKP21741 143 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-212ENST00000466845 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
LRCH3-212ENST00000466845 UBE2AP49459 152 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 EFNA4P52798 201 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 HERVK_113P61574 105 aa4.05□□□□□ -1.76
LRCH3-212ENST00000466845 RPL30P62888 115 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms