RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SRXN1Q9BYN0 137 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 DPH3P1Q9H4G8 78 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 CKLFQ9UBR5 152 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 TP73-AS1Q9UF72 201 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 HHLA3Q9XRX5 114 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 OARD1Q9Y530 152 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 PLXNB2O15031 1838 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 TRAV8-1A0A0A6YYK1 113 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 TRAV17A0A0B4J275 112 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 PLAC8L1A1L4L8 177 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 C8orf87E5RJ46 101 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 SYNGR2O43760 224 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 EPPINO95925 133 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 SUB1P53999 127 aaKnown RBP eCLIP2.3□□□□□ -2.04
VPS13D-203ENST00000466732 UBE2L3P68036 154 aaKnown RBP2.3□□□□□ -2.04
VPS13D-203ENST00000466732 ERCC8Q13216 396 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 RSPO1Q2MKA7 263 aaPredicted RBP2.3□□□□□ -2.04
VPS13D-203ENST00000466732 FAM78AQ5JUQ0 283 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 RPS27LQ71UM5 84 aaKnown RBP2.3□□□□□ -2.04
VPS13D-203ENST00000466732 C6orf201Q7Z4U5 140 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 C10orf105Q8TEF2 133 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 LRRC29Q8WV35 223 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 CHCHD1Q96BP2 118 aaKnown RBP2.3□□□□□ -2.04
VPS13D-203ENST00000466732 FAM60AQ9NP50 221 aa2.3□□□□□ -2.04
VPS13D-203ENST00000466732 POLEQ07864 2286 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TANC2Q9HCD6 1990 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 IGLV3-22A0A075B6J6 115 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 IGKV2D-24A0A075B6R9 120 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 PGPA6NDG6 321 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LINC01619G3V211 115 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LGALS9O00182 355 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 SS18L1O75177 396 aaPredicted RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LEPROTL1O95214 131 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 INSP01308 110 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 ACYP1P07311 99 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 COX5AP20674 150 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 GCHFRP30047 84 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 PEBP1P30086 187 aaKnown RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 FXYD2P54710 66 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 HIST1H4AP62805 103 aaKnown RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 RPL30P62888 115 aaKnown RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 CCL8P80075 99 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LAGE3Q14657 143 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 CST6Q15828 149 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF726P1Q15940 193 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LGALS9CQ6DKI2 356 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 SCGB1D4Q6XE38 83 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TMEM158Q8WZ71 300 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 ABHD14BQ96IU4 210 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TXNDC17Q9BRA2 123 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 TM2D3Q9BRN9 247 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 UPK3BQ9BT76 320 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 DEFB127Q9H1M4 99 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 NXT2Q9NPJ8 142 aaKnown RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 NHP2Q9NX24 153 aaKnown RBP2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LINC00527Q9UJ94 153 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 LY96Q9Y6Y9 160 aa2.29□□□□□ -2.04
VPS13D-203ENST00000466732 A0A0D9SEW6 157 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 J3QT63 122 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 K7ERJ3 54 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 NDUFS5O43920 106 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 IL4P05112 153 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 EFNA4P52798 201 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 HERVK_113P61574 105 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 DAD1P61803 113 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 RPL38P63173 70 aaKnown RBP2.28□□□□□ -2.04
VPS13D-203ENST00000466732 SERF2P84101 59 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF816Q0VGE8 651 aaPredicted RBP2.28□□□□□ -2.04
VPS13D-203ENST00000466732 ORMDL2Q53FV1 153 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 WDR86Q86TI4 376 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 SERP2Q8N6R1 65 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 TMEM230Q96A57 120 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 TRGV9Q99603 122 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 CXCL16Q9H2A7 254 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 EPDR1Q9UM22 224 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 MGAMO43451 1857 aa2.28□□□□□ -2.04
VPS13D-203ENST00000466732 MYMXA0A1B0GTQ4 84 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2L5PA0A1B0GUS4 154 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 A0A1B0GXF2 115 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 A6NDX4 124 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 F6UB75 175 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 INS-IGF2F8WCM5 200 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 J3QLW9 94 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 PIN1P1O15428 100 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 CCL16O15467 120 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 NDUFB3O43676 98 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 PPYP01298 95 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 NPYP01303 97 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 CXCL8P10145 99 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 LGALS3P17931 250 aaKnown RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 MYCNOSP40205 109 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 PSMB2P49721 201 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms