RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 IGKCP01834 107 aa0.07□□□□□ -2.4
LRCH3-211ENST00000466054 OTOSQ8NHW6 89 aa0.07□□□□□ -2.4
LRCH3-211ENST00000466054 BRK1Q8WUW1 75 aa0.07□□□□□ -2.4
LRCH3-211ENST00000466054 TMEM14BQ9NUH8 114 aa0.07□□□□□ -2.4
LRCH3-211ENST00000466054 ESPL1Q14674 2120 aa0.07□□□□□ -2.4
LRCH3-211ENST00000466054 DLEC1Q9Y238 1755 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 KDM6BO15054 1643 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 PTPRGP23470 1445 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 BLMP54132 1417 aaPredicted RBP0.06□□□□□ -2.4
LRCH3-211ENST00000466054 PBRM1Q86U86 1689 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 RREB1Q92766 1687 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 IGHV1-24A0A0C4DH33 117 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 PNMA8CA0A1B0GUJ8 204 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 M0QZK8 103 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 FABP1P07148 127 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 IL7P13232 177 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 TMEM128Q5BJH2 165 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 SAMD13Q5VXD3 122 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 CCDC115Q96NT0 180 aa0.06□□□□□ -2.4
LRCH3-211ENST00000466054 ZCCHC6Q5VYS8 1495 aaKnown RBP0.05□□□□□ -2.4
LRCH3-211ENST00000466054 IFNA21P01568 189 aa0.05□□□□□ -2.4
LRCH3-211ENST00000466054 CD3DP04234 171 aa0.05□□□□□ -2.4
LRCH3-211ENST00000466054 SDC4P31431 198 aa0.05□□□□□ -2.4
LRCH3-211ENST00000466054 OR4S1Q8NGB4 309 aa0.05□□□□□ -2.4
LRCH3-211ENST00000466054 MAP2P11137 1827 aaKnown RBP0.05□□□□□ -2.4
LRCH3-211ENST00000466054 TPRP12270 2363 aaKnown RBP0.05□□□□□ -2.4
LRCH3-211ENST00000466054 MED23Q9ULK4 1368 aa0.05□□□□□ -2.4
LRCH3-211ENST00000466054 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 KIDINS220Q9ULH0 1771 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 TANC1Q9C0D5 1861 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 CCKP06307 115 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 S100A5P33763 92 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 UNQ5815/PRO19632Q6UWF5 114 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 DDA1Q9BW61 102 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 PROK2Q9HC23 129 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 GPR98Q8WXG9 6306 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 CPDO75976 1380 aa0.04□□□□□ -2.4
LRCH3-211ENST00000466054 TRBV10-1A0A0K0K1A3 114 aa0.03□□□□□ -2.4
LRCH3-211ENST00000466054 VMO1Q7Z5L0 202 aa0.03□□□□□ -2.4
LRCH3-211ENST00000466054 TMEM35BQ8NCS4 154 aa0.03□□□□□ -2.4
LRCH3-211ENST00000466054 MCRIP1C9JLW8 97 aa0.02□□□□□ -2.41
LRCH3-211ENST00000466054 SLC25A5P05141 298 aaKnown RBP0.02□□□□□ -2.41
LRCH3-211ENST00000466054 MPC1LP0DKB6 136 aa0.02□□□□□ -2.41
LRCH3-211ENST00000466054 POLR2JP52435 117 aaKnown RBP0.02□□□□□ -2.41
LRCH3-211ENST00000466054 PCBD1P61457 104 aa0.02□□□□□ -2.41
LRCH3-211ENST00000466054 PSPHP78330 225 aa0.02□□□□□ -2.41
LRCH3-211ENST00000466054 IQCJQ1A5X6 159 aa0.02□□□□□ -2.41
LRCH3-211ENST00000466054 SPAG17Q6Q759 2223 aa0.01□□□□□ -2.41
LRCH3-211ENST00000466054 TEX49A0A1B0GTD5 131 aa0.01□□□□□ -2.41
LRCH3-211ENST00000466054 HIST1H1BP16401 226 aaKnown RBP0.01□□□□□ -2.41
LRCH3-211ENST00000466054 METTL1Q9UBP6 276 aaKnown RBP0.01□□□□□ -2.41
LRCH3-211ENST00000466054 LRP5O75197 1615 aa0.01□□□□□ -2.41
LRCH3-211ENST00000466054 PTPRZ1P23471 2315 aaPredicted RBP0.01□□□□□ -2.41
LRCH3-211ENST00000466054 S100GP29377 79 aa0□□□□□ -2.41
LRCH3-211ENST00000466054 RPS28P62857 69 aaKnown RBP0□□□□□ -2.41
LRCH3-211ENST00000466054 PLGLB1Q02325 96 aa0□□□□□ -2.41
LRCH3-211ENST00000466054 PPP1R1CQ8WVI7 109 aa0□□□□□ -2.41
LRCH3-211ENST00000466054 SKA2Q8WVK7 121 aaPredicted RBP0□□□□□ -2.41
LRCH3-211ENST00000466054 PPDPFLQ8WWR9 84 aa0□□□□□ -2.41
LRCH3-211ENST00000466054 SYNE2Q8WXH0 6885 aaKnown RBP0□□□□□ -2.41
LRCH3-211ENST00000466054 DSCR8Q96T75 97 aa0□□□□□ -2.41
LRCH3-211ENST00000466054 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 OR2H2O95918 312 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 APOC1P02654 83 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 TCRAP04437 139 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 HSD17B12Q53GQ0 312 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 VPS25Q9BRG1 176 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 COA4Q9NYJ1 87 aa-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 HELZP42694 1942 aaKnown RBP-0.01□□□□□ -2.41
LRCH3-211ENST00000466054 OVOS2A0A0G2JMS6 1433 aa-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 ARHGAP31Q2M1Z3 1444 aa-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 TRAV12-2A0A075B6T6 113 aa-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 DPM2O94777 84 aa-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 SMIM15Q7Z3B0 74 aa-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 XIRP1Q702N8 1843 aaKnown RBP-0.02□□□□□ -2.41
LRCH3-211ENST00000466054 LRP1Q07954 4544 aaKnown RBP-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 TTC28Q96AY4 2481 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 TRAV2A0A0B4J234 112 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 J3KT08 172 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 PYYP10082 97 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 NEFHP12036 1026 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 OR8I2Q8N0Y5 310 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 TAS2R8Q9NYW2 309 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 CACNA1HO95180 2353 aa-0.03□□□□□ -2.41
LRCH3-211ENST00000466054 CXorf51AA0A1B0GTR3 108 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 TSTD3H0UI37 97 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 Q5BKY6 102 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 TMEM141Q96I45 108 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 SLC35B3Q9H1N7 401 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 BET1LQ9NYM9 111 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 ZFYVE26Q68DK2 2539 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 ABCA1O95477 2261 aa-0.04□□□□□ -2.42
LRCH3-211ENST00000466054 PLXNA2O75051 1894 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 TRAV17A0A0B4J275 112 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 C9JAW5 83 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 SPINK1P00995 79 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 AKR1D1P51857 326 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 TMEM91Q6ZNR0 172 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms