RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 OR2D3Q8NGH3 330 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 KIR2DL5BQ8NHK3 375 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 B4DEV8 164 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 DEFB135Q30KP9 77 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 LINC01587Q99440 93 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 RPP21Q9H633 154 aaKnown RBP12.52□□□□□ -0.4
PTPRU-206ENST00000465525 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 V9GYV3 84 aa12.52□□□□□ -0.4
PTPRU-206ENST00000465525 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
PTPRU-206ENST00000465525 MT-ND4LP03901 98 aa12.51□□□□□ -0.41
PTPRU-206ENST00000465525 A0A087WWC5 75 aa12.51□□□□□ -0.41
PTPRU-206ENST00000465525 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 UBE2CO00762 179 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 GNRH2O43555 120 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 GOLT1BQ9Y3E0 138 aa12.5□□□□□ -0.41
PTPRU-206ENST00000465525 IGHV1OR15-1A0A075B7D0 117 aa12.49□□□□□ -0.41
PTPRU-206ENST00000465525 H7BYZ3 331 aa12.49□□□□□ -0.41
PTPRU-206ENST00000465525 TCL1AP56279 114 aa12.49□□□□□ -0.41
PTPRU-206ENST00000465525 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
PTPRU-206ENST00000465525 RETNQ9HD89 108 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 TIMM8BQ9Y5J9 83 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-206ENST00000465525 CBY3A6NI87 242 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 COLCA2A8K830 154 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 SPRY2O43597 315 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 TYMSP04818 313 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 ANAPC16Q96DE5 110 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
PTPRU-206ENST00000465525 CXorf65A6NEN9 183 aa12.47□□□□□ -0.41
PTPRU-206ENST00000465525 PPP1R2P9O14990 202 aa12.47□□□□□ -0.41
PTPRU-206ENST00000465525 AZU1P20160 251 aa12.47□□□□□ -0.41
PTPRU-206ENST00000465525 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
PTPRU-206ENST00000465525 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
PTPRU-206ENST00000465525 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
PTPRU-206ENST00000465525 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
PTPRU-206ENST00000465525 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.41
PTPRU-206ENST00000465525 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 Q6ZWC4 215 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 CTDSP1Q9GZU7 261 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 A8MWL6 223 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 H3BVH4 76 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 SSTP61278 116 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 NEU1Q99519 415 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 URGCP-MRPS24S4R325 110 aa12.45□□□□□ -0.42
PTPRU-206ENST00000465525 FBN3Q75N90 2809 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 IGHV3-16A0A0C4DH30 117 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 ASIPP42127 132 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 FAM3BP58499 235 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-206ENST00000465525 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
PTPRU-206ENST00000465525 CT83Q5H943 113 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 RNF183Q96D59 192 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 IL36BQ9NZH7 164 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 X6R8D5 127 aa12.44□□□□□ -0.42
PTPRU-206ENST00000465525 XKRY2A2RUG3 117 aa12.43□□□□□ -0.42
PTPRU-206ENST00000465525 S100A4P26447 101 aaKnown RBP12.43□□□□□ -0.42
PTPRU-206ENST00000465525 OR11H2Q8NH07 326 aa12.43□□□□□ -0.42
PTPRU-206ENST00000465525 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
PTPRU-206ENST00000465525 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 SPINK4O60575 86 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
PTPRU-206ENST00000465525 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 GSN-AS1Q9NRJ2 163 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 MUC4Q99102 2169 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 ARMS2P0C7Q2 107 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 TP53TG1Q9Y2A0 90 aa12.42□□□□□ -0.42
PTPRU-206ENST00000465525 C1orf196B1AJZ1 125 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 DEFB4AO15263 64 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 RAB5BP61020 215 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 LYZL1Q6UWQ5 148 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
PTPRU-206ENST00000465525 RAB5AP20339 215 aa12.4□□□□□ -0.42
PTPRU-206ENST00000465525 EMP1P54849 157 aa12.4□□□□□ -0.42
PTPRU-206ENST00000465525 C11orf72Q8NBR9 251 aa12.4□□□□□ -0.42
PTPRU-206ENST00000465525 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
PTPRU-206ENST00000465525 RNASE8Q8TDE3 154 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms