RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 Q6AWC8 147 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 SPXQ9BT56 116 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 CCDC32Q9BV29 185 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 WDR61Q9GZS3 305 aaKnown RBP6.54□□□□□ -1.36
USP39-212ENST00000465514 KCNIP2Q9NS61 270 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 OR5AC2Q9NZP5 309 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 DIRC3C9JPN6 131 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 C17orf112F2Z3M2 114 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 H0YIZ8 118 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 CRYGDP07320 174 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 ASIPP42127 132 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 LRRC37A5PQ49AS3 106 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 MZT2BQ6NZ67 158 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 FAM159AQ6UWV7 190 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 TXNDC17Q9BRA2 123 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 LENEPQ9Y5L5 61 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 TNXBP22105 4242 aa6.53□□□□□ -1.36
USP39-212ENST00000465514 TRAV4A0A0B4J268 109 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 LOC100131303A0A0U1RQF7 123 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 C9JCJ5 164 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 GNRH2O43555 120 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 UBE2L3P68036 154 aaKnown RBP6.52□□□□□ -1.37
USP39-212ENST00000465514 OR4C5Q8NGB2 326 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 NMES1Q9C002 83 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 NAGKQ9UJ70 344 aa6.52□□□□□ -1.37
USP39-212ENST00000465514 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 M0R2P5 195 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
USP39-212ENST00000465514 ASAH1Q13510 395 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 TDRG1Q3Y452 100 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 KHDC3LQ587J8 217 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 FFAR4Q5NUL3 377 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 C10orf126Q8N4M7 172 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 TMED6Q8WW62 240 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 ATP5SQ99766 215 aa6.51□□□□□ -1.37
USP39-212ENST00000465514 PGPA6NDG6 321 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 PSCAO43653 123 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 EIF3GO75821 320 aaKnown RBP eCLIP6.5□□□□□ -1.37
USP39-212ENST00000465514 H2AFB1P0C5Y9 115 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 TAS2R45P59539 299 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 CYCSP99999 105 aaKnown RBP6.5□□□□□ -1.37
USP39-212ENST00000465514 SH2D6Q7Z4S9 175 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 NHLRC2Q8NBF2 726 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 OTORQ9NRC9 128 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 MBD2Q9UBB5 411 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
USP39-212ENST00000465514 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 LRCOL1A6NCL2 159 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 TYMSP04818 313 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 GATA1P15976 413 aaPredicted RBP6.49□□□□□ -1.37
USP39-212ENST00000465514 PPT1P50897 306 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 H2BFSP57053 126 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 TIRAPP58753 221 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 GOLT1AQ6ZVE7 132 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 ENKURQ8TC29 256 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 SCGB1C1Q8TD33 95 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
USP39-212ENST00000465514 TVP23CQ96ET8 276 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 SMIM3Q9BZL3 60 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 HSPB11Q9Y547 144 aa6.49□□□□□ -1.37
USP39-212ENST00000465514 TRAV8-1A0A0A6YYK1 113 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 F6UZH7 168 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 LINC01556Q5JQF7 62 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 SDF2L1Q9HCN8 221 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 TREM1Q9NP99 234 aa6.48□□□□□ -1.37
USP39-212ENST00000465514 TRAV8-6A0A0B4J262 113 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
USP39-212ENST00000465514 INMT-MINDY4F8WBC2 141 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 MPC2O95563 127 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 C1QBP02746 253 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 PFN1P07737 140 aaKnown RBP6.47□□□□□ -1.37
USP39-212ENST00000465514 RPL12P30050 165 aaKnown RBP6.47□□□□□ -1.37
USP39-212ENST00000465514 GNG5P63218 68 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 OR10J3Q5JRS4 329 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 Q6ZSA8 131 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 LINC00299Q6ZSB3 139 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 ARL6IP6Q8N6S5 226 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 S100ZQ8WXG8 99 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 ASB13Q8WXK3 278 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 KCNS1Q96KK3 526 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 Q9HAA7 133 aa6.47□□□□□ -1.37
USP39-212ENST00000465514 IGHV3-73A0A0B4J1V6 119 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 A0A1W2PPV4 95 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 HMGB3O15347 200 aaKnown RBP6.46□□□□□ -1.38
USP39-212ENST00000465514 RS1O15537 224 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 UPK1BO75841 260 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 IGHV3-33P01772 117 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
USP39-212ENST00000465514 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms