RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LINC00032P0C843 101 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 ADCYAP1P18509 176 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 CLECL1Q8IZS7 167 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 DYNLRB2Q8TF09 96 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 V9GYS6 101 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 SHANK3Q9BYB0 1731 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 TRAV14DV4A0A0A6YYC5 116 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 PITX3O75364 302 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 GYPBP06028 91 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 BRS3P32247 399 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 DEFB113Q30KQ7 82 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 RPL7L1Q6DKI1 246 aaKnown RBP2.23□□□□□ -2.05
PTCD3-205ENST00000464541 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 C5orf17Q8NAS9 161 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 OR10AG1Q8NH19 301 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 TSKUQ8WUA8 353 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 WDR97A6NE52 1622 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 PPIP5K1Q6PFW1 1433 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 TTC37Q6PGP7 1564 aa2.23□□□□□ -2.05
PTCD3-205ENST00000464541 WDR90Q96KV7 1748 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 ZFYVE16Q7Z3T8 1539 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 ABCC10Q5T3U5 1492 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 TANC2Q9HCD6 1990 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 PIRTP0C851 137 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 C9orf163Q8N9P6 203 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 ADGRB1O14514 1584 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 SLIT2O94813 1529 aa2.22□□□□□ -2.05
PTCD3-205ENST00000464541 MYH9P35579 1960 aaKnown RBP2.21□□□□□ -2.05
PTCD3-205ENST00000464541 C2orf70A6NJV1 201 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 POLR2JP52435 117 aaKnown RBP2.21□□□□□ -2.06
PTCD3-205ENST00000464541 PDE6HQ13956 83 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 FOXI2Q6ZQN5 318 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 Q6ZS92 163 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 PPDPFLQ8WWR9 84 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 TIMM21Q9BVV7 248 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 DPY30Q9C005 99 aa2.21□□□□□ -2.06
PTCD3-205ENST00000464541 ZFC3H1O60293 1989 aaKnown RBP2.21□□□□□ -2.06
PTCD3-205ENST00000464541 SMARCA4P51532 1647 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 NRKQ7Z2Y5 1582 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 UNQ5815/PRO19632Q6UWF5 114 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 ZNF833PQ6ZTB9 187 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 ORMDL1Q9P0S3 153 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 SCP2D1Q9UJQ7 156 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 NCKAP5O14513 1909 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 KIAA2026Q5HYC2 2103 aa2.2□□□□□ -2.06
PTCD3-205ENST00000464541 MYH6P13533 1939 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 RTEL1-TNFRSF6BF6WH68 1400 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 OOSP1A8MZH6 123 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 F8W1H4 67 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 H3BQ15 152 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 SSSCA1O60232 199 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 MPC2O95563 127 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 COX7CP15954 63 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-205ENST00000464541 UBA52P62987 128 aaKnown RBP2.19□□□□□ -2.06
PTCD3-205ENST00000464541 DCDP81605 110 aaKnown RBP2.19□□□□□ -2.06
PTCD3-205ENST00000464541 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 LSM10Q969L4 123 aaKnown RBP2.19□□□□□ -2.06
PTCD3-205ENST00000464541 FAIMQ9NVQ4 179 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 PTPRBP23467 1997 aa2.19□□□□□ -2.06
PTCD3-205ENST00000464541 CACNA1GO43497 2377 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 DAPK1P53355 1430 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 TRAV17A0A0B4J275 112 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 A0A0G2JQZ4 141 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 RHOHQ15669 191 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 FAM74A1Q5RGS3 127 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 Q8TAT8 98 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 NDUFA12Q9UI09 145 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 MYH13Q9UKX3 1938 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 CUL7Q14999 1698 aa2.18□□□□□ -2.06
PTCD3-205ENST00000464541 ATG2AQ2TAZ0 1938 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 SCN3AQ9NY46 2000 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 MUC6Q6W4X9 2439 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 CUL9Q8IWT3 2517 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 UBE2L5PA0A1B0GUS4 154 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 CBLN1P23435 193 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 UBE2L3P68036 154 aaKnown RBP2.17□□□□□ -2.06
PTCD3-205ENST00000464541 Q1T7F1 81 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 ZCCHC23Q6ZST2 131 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 C5orf38Q86SI9 138 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 C10orf105Q8TEF2 133 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 ATG5Q9H1Y0 275 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 TMEM106BQ9NUM4 274 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 RAPGEF2Q9Y4G8 1499 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 CPAMD8Q8IZJ3 1885 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 DIDO1Q9BTC0 2240 aaKnown RBP2.17□□□□□ -2.06
PTCD3-205ENST00000464541 CITO14578 2027 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 CCDC88CQ9P219 2028 aa2.17□□□□□ -2.06
PTCD3-205ENST00000464541 TROQ12816 1431 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-205ENST00000464541 PLXNA3P51805 1871 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 H3BRM9 83 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 IGHV3-33P01772 117 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 CNBPP62633 177 aaKnown RBP2.16□□□□□ -2.06
PTCD3-205ENST00000464541 IQCJQ1A5X6 159 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms