RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZNF492Q9P255 531 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 AMMECR1Q9Y4X0 333 aaPredicted RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 DENND4CQ5VZ89 1909 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 RGPD2P0DJD1 1756 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 KDM6BO15054 1643 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LRP5O75197 1615 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 ZFC3H1O60293 1989 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 AFDNP55196 1824 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 SLIT2O94813 1529 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRPM7Q96QT4 1865 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 COL24A1Q17RW2 1714 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 RGPD4Q7Z3J3 1758 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 UBR2Q8IWV8 1755 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 ADAMTSL1Q8N6G6 1762 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRGV5A0A0B4J1U4 118 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV2A0A0B4J234 112 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV1-2A0A0B4J238 106 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 TRAV1-1A0A0B4J248 108 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 IGHV1-58A0A0C4DH39 117 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 LOC107986453A0A1B0GWG9 222 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 OOSP1A8MZH6 123 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 IGLL5B9A064 214 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 H3BT86 120 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 FXYD1O00168 92 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 SDCBPO00560 298 aaPredicted RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 PDCD6O75340 191 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 ACYP1P07311 99 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 HLA-DRB4P13762 266 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 CSN1S1P47710 185 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 SMIM11AP58511 58 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 WFDC2Q14508 124 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 CST6Q15828 149 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 LGALS9BQ3B8N2 356 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 CENPWQ5EE01 88 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 C1orf140Q5VVS0 124 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 RPL7L1Q6DKI1 246 aaKnown RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 LINC00596Q86U02 117 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 OR5AS1Q8N127 324 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 STAG3L4Q8TBR4 150 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 MYOZ3Q8TDC0 251 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 FGF13Q92913 245 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 C2orf50Q96LR7 162 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 IGF2BP2-AS1Q96M15 143 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 GPX7Q96SL4 187 aaPredicted RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 PRSS27Q9BQR3 290 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 OTORQ9NRC9 128 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 DNAJC15Q9Y5T4 150 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 HLA-DRB4X5D2U9 266 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 PATJQ8NI35 1801 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM208AQ9UK61 1670 aaKnown RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 NUP210Q8TEM1 1887 aaPredicted RBP1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 KCPQ6ZWJ8 1503 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 MON2Q7Z3U7 1717 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 PKD1L3Q7Z443 1732 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 NWD2Q9ULI1 1742 aa1.86□□□□□ -2.11
HMGXB4-205ENST00000464480 HELZP42694 1942 aaKnown RBP1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 FANCMQ8IYD8 2048 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 IGHV1-24A0A0C4DH33 117 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 MDFIC2A0A1B0GVS7 189 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 RBAKDNA6NC62 111 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 M0R129 80 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 SYNGR2O43760 224 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 PGLYRP1O75594 196 aaPredicted RBP1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 IGLV6-57P01721 117 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKCP01834 107 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 CFAP126Q5VTH2 177 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 Q6ZS49 121 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 C6orf201Q7Z4U5 140 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 ATP5L2Q7Z4Y8 100 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 SPATA12Q7Z6I5 190 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 KLK6Q92876 244 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 CARD19Q96LW7 228 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 OR8B2Q96RD0 313 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 AMELYQ99218 206 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 SMIM7Q9BQ49 75 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM103A1Q9BTL3 118 aaKnown RBP1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 PLA2G12AQ9BZM1 189 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 CMC2Q9NRP2 79 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 C3P01024 1663 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 C5P01031 1676 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 ALS2Q96Q42 1657 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 MYLKQ15746 1914 aa1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 SIPA1L3O60292 1781 aaPredicted RBP1.85□□□□□ -2.11
HMGXB4-205ENST00000464480 GBF1Q92538 1859 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 TMEM131Q92545 1883 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 SHANK1Q9Y566 2161 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 C4AP0C0L4 1744 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 C4BP0C0L5 1744 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 PIGBOS1A0A0B4J2F0 54 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 UBE2L5PA0A1B0GUS4 154 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 PGPA6NDG6 321 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 K7ERS5 55 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 OR1I1O60431 355 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 C1QAP02745 245 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms