RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 UBE2D2P62837 147 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 FAM27E3Q08E93 113 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 ERCC8Q13216 396 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 KLK9Q2XQG4 91 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 DEFB109BQ30KR1 87 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 Q6Q795 121 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 C1orf122Q6ZSJ8 110 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 Q6ZUT4 128 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 SH2D6Q7Z4S9 175 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 SBSPONQ8IVN8 264 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 LINC00477Q96M19 166 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 PRADC1Q9BSG0 188 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 KLK9Q9UKQ9 250 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 ZNF318Q5VUA4 2279 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 SPTBN4Q9H254 2564 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 TRAV26-1A0A087WT03 109 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 TRBV7-1A0A0A6YYK4 115 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 TRAV21A0A0B4J279 112 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 SNCGO76070 127 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 TSPAN13O95857 204 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 ZNF80P51504 273 aaPredicted RBP5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 HES1Q14469 280 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 LPAL2Q16609 132 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 MORN3Q6PF18 240 aaPredicted RBP5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 LY6G5BQ8NDX9 201 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 PRSS33Q8NF86 280 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 Q8TAT8 98 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 FAM110DQ8TAY7 271 aaPredicted RBP5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 EEF1AKMT3Q96AZ1 226 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 SPANXCQ9NY87 97 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 ONECUT1Q9UBC0 465 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 PRO1854Q9UHT4 67 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 KNTC1P50748 2209 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 CFAP47Q6ZTR5 3102 aa5.53□□□□□ -1.52
CLSTN1-204ENST00000464286 MAST4O15021 2626 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 MALRD1Q5VYJ5 2156 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 CTSGP08311 255 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 P0DMU3 169 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 FAM231AP0DMU4 169 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 FAM231CP0DMU5 169 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 PRTN3P24158 256 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 S100A4P26447 101 aaKnown RBP5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 ARL3P36405 182 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 PMVKQ15126 192 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 ATXN8Q156A1 80 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 AMTNQ6UX39 209 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 C2orf66Q6UXQ4 117 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 DYNAPQ8N1N2 210 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 C10orf126Q8N4M7 172 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 OR10J6PQ8NGY7 276 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 CFHR4Q92496 578 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 LINC01600Q96MT4 127 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 PHLDA3Q9Y5J5 127 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
CLSTN1-204ENST00000464286 A0A0B4J2C4 111 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 C11orf86A6NJI1 115 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 VCYO14598 125 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 BUB3O43684 328 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 RPL11P62913 178 aaKnown RBP5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 EBI3Q14213 229 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 TTC32Q5I0X7 151 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 NDUFA11Q86Y39 141 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 Q8N1Y9 231 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 SLC25A29Q8N8R3 303 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 KIR2DL4Q99706 377 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 MSRB1Q9NZV6 116 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 X6R8D5 127 aa5.51□□□□□ -1.53
CLSTN1-204ENST00000464286 IGKV3D-20A0A0C4DH25 116 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 PRSS29PA6NIE9 313 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 ODF3BA8MYP8 253 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 COX6CP09669 75 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 SRD5A1P18405 259 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 BAALCQ8WXS3 180 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 PLEKHB2Q96CS7 222 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 C16orf92Q96LL3 132 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 TTTY13Q9BZ97 58 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 AGPAT4-IT1Q9H0P7 198 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 SMAD5-AS1Q9Y6J3 95 aa5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 ANKRD11Q6UB99 2663 aaPredicted RBP5.5□□□□□ -1.53
CLSTN1-204ENST00000464286 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 A0A087WW49 117 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 A0A0G2JNJ9 132 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 A0A0J9YX75 114 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 A0A0J9YY99 117 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 GAGE12JA6NER3 117 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 E7EQL1 145 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 H3BVH4 76 aa5.49□□□□□ -1.53
CLSTN1-204ENST00000464286 RHODO00212 210 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms