RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TMEM158Q8WZ71 300 aa14.05□□□□□ -0.16
CCDC78-206ENST00000463539 FAM110AQ9BQ89 295 aa14.05□□□□□ -0.16
CCDC78-206ENST00000463539 TRAV12-3A0A0B4J271 114 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 MT-ND6P03923 174 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 CD7P09564 240 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 IGLC6P0CF74 106 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 CAMPP49913 170 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 SHISA2Q6UWI4 295 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 LYZL1Q6UWQ5 148 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 MCRIP2Q9BUT9 160 aaKnown RBP14.04□□□□□ -0.16
CCDC78-206ENST00000463539 RBMY1BA6NDE4 496 aaKnown RBP14.04□□□□□ -0.16
CCDC78-206ENST00000463539 RBMY1EA6NEQ0 496 aaKnown RBP14.04□□□□□ -0.16
CCDC78-206ENST00000463539 PHOX2AO14813 284 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 RBMY1DP0C7P1 496 aaKnown RBP14.04□□□□□ -0.16
CCDC78-206ENST00000463539 ARMS2P0C7Q2 107 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 CTRLP40313 264 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 MUC21Q5SSG8 566 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 TMEM136Q6ZRR5 245 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 STHQ8IWL8 128 aa14.04□□□□□ -0.16
CCDC78-206ENST00000463539 RIGQ13278 110 aa14.03□□□□□ -0.16
CCDC78-206ENST00000463539 ANXA2RQ3ZCQ2 193 aa14.03□□□□□ -0.16
CCDC78-206ENST00000463539 WFDC9Q8NEX5 89 aa14.03□□□□□ -0.16
CCDC78-206ENST00000463539 MRPL18Q9H0U6 180 aaKnown RBP14.03□□□□□ -0.16
CCDC78-206ENST00000463539 HLA-DQA1P01909 254 aa14.02□□□□□ -0.16
CCDC78-206ENST00000463539 FXYD7P58549 80 aa14.02□□□□□ -0.16
CCDC78-206ENST00000463539 CLUHP3Q96NS8 147 aa14.02□□□□□ -0.16
CCDC78-206ENST00000463539 ZNF324O75467 553 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-206ENST00000463539 FAM159AQ6UWV7 190 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 A0A1B0GW15 77 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 F2Z2F3 143 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BKO60814 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BJP06899 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 TRGC1P0CF51 173 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BOP23527 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BBP33778 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BDP58876 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BCP62807 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST2H2BEQ16778 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BHQ93079 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BNQ99877 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 HIST1H2BMQ99879 126 aa14.01□□□□□ -0.17
CCDC78-206ENST00000463539 STAB1Q9NY15 2570 aa14□□□□□ -0.17
CCDC78-206ENST00000463539 S100A8P05109 93 aa14□□□□□ -0.17
CCDC78-206ENST00000463539 TRPT1Q86TN4 253 aaKnown RBP14□□□□□ -0.17
CCDC78-206ENST00000463539 C19orf73Q9NVV2 129 aa14□□□□□ -0.17
CCDC78-206ENST00000463539 MUC21A0A0G2JKD1 596 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 MUC21A0A140T8X8 626 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 CRXO43186 299 aaPredicted RBP13.99□□□□□ -0.17
CCDC78-206ENST00000463539 ASIPP42127 132 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 SSTP61278 116 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 KCNS1Q96KK3 526 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 H3BVH4 76 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
CCDC78-206ENST00000463539 CNFNQ9BYD5 112 aa13.99□□□□□ -0.17
CCDC78-206ENST00000463539 COL6A5A8TX70 2615 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 APCSP02743 223 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 S100A6P06703 90 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 IGLL1P15814 213 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 TDRG1Q3Y452 100 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 GTSCR1Q86UQ5 136 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 SSBP4Q9BWG4 385 aaPredicted RBP13.98□□□□□ -0.17
CCDC78-206ENST00000463539 AGRNO00468 2067 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 NOTCH3Q9UM47 2321 aa13.98□□□□□ -0.17
CCDC78-206ENST00000463539 OR5AL1P0C617 328 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 TRRAPQ9Y4A5 3859 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 IGHV1OR15-1A0A075B7D0 117 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 GNRH2O43555 120 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 SNAI2O43623 268 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 NUTF2P61970 127 aaKnown RBP13.97□□□□□ -0.17
CCDC78-206ENST00000463539 SLAQ13239 276 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 TWIST1Q15672 202 aa13.97□□□□□ -0.17
CCDC78-206ENST00000463539 TIMM8BQ9Y5J9 83 aaPredicted RBP13.97□□□□□ -0.17
CCDC78-206ENST00000463539 INSP01308 110 aa13.96□□□□□ -0.17
CCDC78-206ENST00000463539 AMBPP02760 352 aa13.96□□□□□ -0.17
CCDC78-206ENST00000463539 RBMY1A1P0DJD3 496 aaKnown RBP13.96□□□□□ -0.17
CCDC78-206ENST00000463539 RBMY1CP0DJD4 496 aa13.96□□□□□ -0.17
CCDC78-206ENST00000463539 NTF3P20783 257 aa13.96□□□□□ -0.17
CCDC78-206ENST00000463539 RBMY1FQ15415 496 aaKnown RBP13.96□□□□□ -0.17
CCDC78-206ENST00000463539 MED14OSP0DP75 135 aa13.95□□□□□ -0.18
CCDC78-206ENST00000463539 DNLZQ5SXM8 178 aa13.95□□□□□ -0.18
CCDC78-206ENST00000463539 OR10AG1Q8NH19 301 aa13.95□□□□□ -0.18
CCDC78-206ENST00000463539 PRR31Q5SQ13 230 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 LURAP1LQ8IV03 231 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 GATD1Q8NB37 220 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 WIPF1O43516 503 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 KIAA1644Q3SXP7 199 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 SPANXN1Q5VSR9 72 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 XCL2Q9UBD3 114 aa13.94□□□□□ -0.18
CCDC78-206ENST00000463539 RNASE3P12724 160 aaKnown RBP13.93□□□□□ -0.18
CCDC78-206ENST00000463539 CACNG7P62955 275 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 ZNF493Q6ZR52 646 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 Q8N1Y9 231 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 DEFB125Q8N687 156 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 C20orf144Q9BQM9 153 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 PHLDA3Q9Y5J5 127 aa13.93□□□□□ -0.18
CCDC78-206ENST00000463539 NDUFA6P56556 154 aa13.92□□□□□ -0.18
CCDC78-206ENST00000463539 SCRT2Q9NQ03 307 aa13.92□□□□□ -0.18
CCDC78-206ENST00000463539 MSRB1Q9NZV6 116 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms