RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PAX4O43316 350 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 GNRH2O43555 120 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 PPT1P50897 306 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 SMUG1Q53HV7 270 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 RASL10AQ92737 203 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 PRO0255Q9UI72 69 aa11.28□□□□□ -0.6
COL1A1-202ENST00000463440 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 M0R2P5 195 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 RTL8CO15255 209 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 BCL2L11O43521 198 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 GCGP01275 180 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 TYMSP04818 313 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.61
COL1A1-202ENST00000463440 SEC11BP0C7V7 166 aa11.27□□□□□ -0.61
COL1A1-202ENST00000463440 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
COL1A1-202ENST00000463440 ZNF471Q9BX82 626 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-202ENST00000463440 A0A096LPF7 62 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 UMAD1C9J7I0 102 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 PEX7O00628 323 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
COL1A1-202ENST00000463440 ESRGQ1W209 222 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 C1orf134Q5TEV5 83 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 HIST1H2BAQ96A08 127 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
COL1A1-202ENST00000463440 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 PFDN1O60925 122 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 FHL2Q14192 279 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 Q9H8V8 135 aa11.25□□□□□ -0.61
COL1A1-202ENST00000463440 SFTA3P0C7M3 94 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 FHITP49789 147 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 CRYBA4P53673 196 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 ZNF479Q96JC4 524 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
COL1A1-202ENST00000463440 ARL2-SNX15V9GYD0 113 aa11.24□□□□□ -0.61
COL1A1-202ENST00000463440 TRAV4A0A0B4J268 109 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 OR4C5Q8NGB2 326 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 TCEAL7Q9BRU2 100 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
COL1A1-202ENST00000463440 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
COL1A1-202ENST00000463440 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
COL1A1-202ENST00000463440 Q86TA4 180 aa11.22□□□□□ -0.61
COL1A1-202ENST00000463440 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
COL1A1-202ENST00000463440 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
COL1A1-202ENST00000463440 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
COL1A1-202ENST00000463440 UBE2G1P62253 170 aa11.21□□□□□ -0.61
COL1A1-202ENST00000463440 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
COL1A1-202ENST00000463440 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.61
COL1A1-202ENST00000463440 ZFP30Q9Y2G7 519 aa11.21□□□□□ -0.61
COL1A1-202ENST00000463440 C9JCJ5 164 aa11.2□□□□□ -0.62
COL1A1-202ENST00000463440 PAGE4O60829 102 aa11.2□□□□□ -0.62
COL1A1-202ENST00000463440 ORM1P02763 201 aa11.2□□□□□ -0.62
COL1A1-202ENST00000463440 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
COL1A1-202ENST00000463440 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
COL1A1-202ENST00000463440 A0A1B0GV50 99 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 AKR1C3P42330 323 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 LGALSLQ3ZCW2 172 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-202ENST00000463440 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 TCTE3Q8IZS6 198 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
COL1A1-202ENST00000463440 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 A0A1W2PPQ1 181 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 CIDEAO60543 219 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 GYPEP15421 78 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
COL1A1-202ENST00000463440 SRIP30626 198 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
COL1A1-202ENST00000463440 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 PTH2Q96A98 100 aa11.18□□□□□ -0.62
COL1A1-202ENST00000463440 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 K7EQD1 137 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
COL1A1-202ENST00000463440 ASIPP42127 132 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 Q6ZNX1 250 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
COL1A1-202ENST00000463440 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
COL1A1-202ENST00000463440 B4DEV8 164 aa11.16□□□□□ -0.62
COL1A1-202ENST00000463440 SIVA1O15304 175 aa11.16□□□□□ -0.62
COL1A1-202ENST00000463440 RS1O15537 224 aa11.16□□□□□ -0.62
COL1A1-202ENST00000463440 NXPH4O95158 308 aa11.16□□□□□ -0.62
COL1A1-202ENST00000463440 LTAP01374 205 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms