RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 DAPK1P53355 1430 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 ODF3BA8MYP8 253 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 MRPS14O60783 128 aaKnown RBP3.73□□□□□ -1.81
SGCE-209ENST00000462731 ERC2-IT1O76042 136 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 CYB5AP00167 134 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 CCKP06307 115 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 SLC25A6P12236 298 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 NDPQ00604 133 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 ZNF791Q3KP31 576 aaPredicted RBP3.73□□□□□ -1.81
SGCE-209ENST00000462731 PMCHL2Q9BQD1 86 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 USP54Q70EL1 1684 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 MYO9BQ13459 2157 aa3.73□□□□□ -1.81
SGCE-209ENST00000462731 TRAV10A0A0B4J240 114 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 TRBV7-7A0A0K0K1E9 115 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 TCRBV4S1A1TA0A5B7 111 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 IGKCP01834 107 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 CBLN1P23435 193 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 POLR2JP52435 117 aaKnown RBP3.72□□□□□ -1.81
SGCE-209ENST00000462731 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
SGCE-209ENST00000462731 TSLPQ969D9 159 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 REG4Q9BYZ8 158 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 MRPL35Q9NZE8 188 aaKnown RBP3.72□□□□□ -1.81
SGCE-209ENST00000462731 UQCR10Q9UDW1 63 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 RABAC1Q9UI14 185 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 LHFPL6Q9Y693 200 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 R4GN34 69 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 SHANK3Q9BYB0 1731 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 CDC42BPBQ9Y5S2 1711 aa3.72□□□□□ -1.81
SGCE-209ENST00000462731 CCDC88CQ9P219 2028 aa3.71□□□□□ -1.81
SGCE-209ENST00000462731 ROBO1Q9Y6N7 1651 aa3.71□□□□□ -1.81
SGCE-209ENST00000462731 SCAPERQ9BY12 1400 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 CHD1O14646 1710 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 IGKV3D-11A0A0A0MRZ8 115 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 IGLC7A0M8Q6 106 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 SFT2D2O95562 160 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 KRTDAPP60985 99 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 RHOHQ15669 191 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 ALKAL2Q6UX46 152 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 CCDC88BA6NC98 1476 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 KIDINS220Q9ULH0 1771 aa3.71□□□□□ -1.82
SGCE-209ENST00000462731 ARAP2Q8WZ64 1704 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 SCN4AP35499 1836 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 SLX4Q8IY92 1834 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 IGKV1D-17A0A075B6S4 117 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 TMSB15BA0A087X1C1 80 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 TRAV12-1A0A0B4J245 112 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 ATOX1O00244 68 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 ASAH2BP0C7U1 165 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 DEFB113Q30KQ7 82 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 C2orf82Q6UX34 121 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 Q9BRP9 147 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 NDUFB11Q9NX14 153 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 SMAD5-AS1Q9Y6J3 95 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 TNRC6AQ8NDV7 1962 aaKnown RBP3.7□□□□□ -1.82
SGCE-209ENST00000462731 SCN3AQ9NY46 2000 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 TUBGCP6Q96RT7 1819 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 ADGRB3O60242 1522 aa3.7□□□□□ -1.82
SGCE-209ENST00000462731 IFT140Q96RY7 1462 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 A6NIN4 97 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 CXCL8P10145 99 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 UBE2G1P62253 170 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 CCL8P80075 99 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 ERHP84090 104 aaKnown RBP3.69□□□□□ -1.82
SGCE-209ENST00000462731 C9orf116Q5BN46 136 aaPredicted RBP3.69□□□□□ -1.82
SGCE-209ENST00000462731 S100A7L2Q5SY68 101 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 SLC48A1Q6P1K1 146 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 LINC00299Q6ZSB3 139 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 ZCCHC23Q6ZST2 131 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 MYOZ3Q8TDC0 251 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
SGCE-209ENST00000462731 S100A16Q96FQ6 103 aaKnown RBP3.69□□□□□ -1.82
SGCE-209ENST00000462731 MARF1Q9Y4F3 1742 aaKnown RBP3.69□□□□□ -1.82
SGCE-209ENST00000462731 PRDM15P57071 1507 aaPredicted RBP3.69□□□□□ -1.82
SGCE-209ENST00000462731 THOC2Q8NI27 1593 aaKnown RBP3.68□□□□□ -1.82
SGCE-209ENST00000462731 PLIN4Q96Q06 1357 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 TRAV40A0A0B4J280 105 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 MUC21A0A140T8X8 626 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 P0C880 135 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 RPL7L1Q6DKI1 246 aaKnown RBP3.68□□□□□ -1.82
SGCE-209ENST00000462731 C9orf163Q8N9P6 203 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 MGST2Q99735 147 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 SMCO4Q9NRQ5 59 aa3.68□□□□□ -1.82
SGCE-209ENST00000462731 CHD3Q12873 2000 aaKnown RBP3.68□□□□□ -1.82
SGCE-209ENST00000462731 IGKV3-15P01624 115 aa3.67□□□□□ -1.82
SGCE-209ENST00000462731 IGKV3-11P04433 115 aa3.67□□□□□ -1.82
SGCE-209ENST00000462731 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SGCE-209ENST00000462731 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
SGCE-209ENST00000462731 MUC4Q99102 2169 aa3.67□□□□□ -1.82
SGCE-209ENST00000462731 KIAA1549Q9HCM3 1950 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 APOC3P02656 99 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 HINT1P49773 126 aaPredicted RBP3.66□□□□□ -1.82
SGCE-209ENST00000462731 LY6EQ16553 131 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 ZNF833PQ6ZTB9 187 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 Q8TAT8 98 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 ZNF431Q8TF32 576 aaPredicted RBP3.66□□□□□ -1.82
SGCE-209ENST00000462731 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms