RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
SKA3-204ENST00000462482 INMT-MINDY4F8WBC2 141 aa10.42□□□□□ -0.74
SKA3-204ENST00000462482 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
SKA3-204ENST00000462482 Q5VSD8 79 aa10.42□□□□□ -0.74
SKA3-204ENST00000462482 NDFIP1Q9BT67 221 aa10.42□□□□□ -0.74
SKA3-204ENST00000462482 GNRH2O43555 120 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 SSNA1O43805 119 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 PFN1P07737 140 aaKnown RBP10.41□□□□□ -0.74
SKA3-204ENST00000462482 XGP55808 180 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 KRTAP10-1P60331 282 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 PQLC2Q6ZP29 291 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 GOLT1AQ6ZVE7 132 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 TREM1Q9NP99 234 aa10.41□□□□□ -0.74
SKA3-204ENST00000462482 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
SKA3-204ENST00000462482 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 RPL12P30050 165 aaKnown RBP10.4□□□□□ -0.74
SKA3-204ENST00000462482 TIRAPP58753 221 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 ASB13Q8WXK3 278 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 PRADC1Q9BSG0 188 aa10.4□□□□□ -0.74
SKA3-204ENST00000462482 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 F6UZH7 168 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 CIDEAO60543 219 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 UPK1BO75841 260 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 MPC2O95563 127 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
SKA3-204ENST00000462482 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
SKA3-204ENST00000462482 K7EQM0 130 aa10.38□□□□□ -0.75
SKA3-204ENST00000462482 TYMSP04818 313 aa10.38□□□□□ -0.75
SKA3-204ENST00000462482 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
SKA3-204ENST00000462482 H2BFSP57053 126 aa10.38□□□□□ -0.75
SKA3-204ENST00000462482 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 RHOHQ15669 191 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 ZNF876PQ49A33 203 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 LINC01556Q5JQF7 62 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 SH3BGRL3Q9H299 93 aa10.37□□□□□ -0.75
SKA3-204ENST00000462482 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
SKA3-204ENST00000462482 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
SKA3-204ENST00000462482 DEFA1P59665 94 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 DEFA3P59666 94 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 OR10G9Q8NGN4 311 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 OR10G7Q8NGN6 311 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 Q9HAA7 133 aa10.36□□□□□ -0.75
SKA3-204ENST00000462482 TAAR5O14804 337 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 GNG5P63218 68 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 MARVELD1Q9BSK0 173 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 TM2D2Q9BX73 214 aa10.35□□□□□ -0.75
SKA3-204ENST00000462482 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
SKA3-204ENST00000462482 RAB2AP61019 212 aa10.34□□□□□ -0.75
SKA3-204ENST00000462482 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
SKA3-204ENST00000462482 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.76
SKA3-204ENST00000462482 RS1O15537 224 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
SKA3-204ENST00000462482 LELP1Q5T871 98 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 Q6ZSN1 163 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
SKA3-204ENST00000462482 GCGP01275 180 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 TCRAP04437 139 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 MGST1P10620 155 aaKnown RBP10.32□□□□□ -0.76
SKA3-204ENST00000462482 SMUG1Q53HV7 270 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 Q8N814 137 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 ATP6V0E2Q8NHE4 81 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
SKA3-204ENST00000462482 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
SKA3-204ENST00000462482 MBP02144 154 aa10.31□□□□□ -0.76
SKA3-204ENST00000462482 PSG8Q9UQ74 426 aa10.31□□□□□ -0.76
SKA3-204ENST00000462482 STAG3L2P0CL84 134 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 STAG3L3P0CL85 134 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
SKA3-204ENST00000462482 HAMPP81172 84 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
SKA3-204ENST00000462482 IFITM3Q01628 133 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 LAGE3Q14657 143 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 PRNTQ86SH4 94 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 PTH2Q96A98 100 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
SKA3-204ENST00000462482 GCHFRP30047 84 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 SUMO1P63165 101 aaKnown RBP10.29□□□□□ -0.76
SKA3-204ENST00000462482 TOR2AQ5JU69 321 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 ZNF506Q5JVG8 444 aa10.29□□□□□ -0.76
SKA3-204ENST00000462482 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms