RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
LINC01140-201ENST00000461990 C17orf77Q96MU5 243 aa7.08□□□□□ -1.28
LINC01140-201ENST00000461990 A0A1W2PR77 199 aa7.07□□□□□ -1.28
LINC01140-201ENST00000461990 SMIM2Q9BVW6 85 aa7.07□□□□□ -1.28
LINC01140-201ENST00000461990 MBD3L4A6NDZ8 208 aaPredicted RBP7.07□□□□□ -1.28
LINC01140-201ENST00000461990 MBD3L3A6NE82 208 aaPredicted RBP7.07□□□□□ -1.28
LINC01140-201ENST00000461990 MBD3L5A6NJ08 208 aaPredicted RBP7.07□□□□□ -1.28
LINC01140-201ENST00000461990 ZNF22P17026 224 aaPredicted RBP7.07□□□□□ -1.28
LINC01140-201ENST00000461990 GATA4P43694 442 aa7.07□□□□□ -1.28
LINC01140-201ENST00000461990 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 LYZP61626 148 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 COL6A3P12111 3177 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 IGHV4-4A0A075B6R2 117 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 IGLV2-23P01705 113 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 ZNF883P0CG24 379 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
LINC01140-201ENST00000461990 FAM201AQ5SY85 155 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 ASCL5Q7RTU5 278 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 TMEM223A0PJW6 202 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 TRIAP1O43715 76 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 MZT1Q08AG7 82 aa7.06□□□□□ -1.28
LINC01140-201ENST00000461990 ZNF256Q9Y2P7 627 aaPredicted RBP7.06□□□□□ -1.28
LINC01140-201ENST00000461990 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 M0R3E3 92 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 IGHV4-39P01824 125 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 MRGPRG-AS1Q2M3A8 158 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 UPK3BQ9BT76 320 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 RPUSD1Q9UJJ7 312 aaKnown RBP7.05□□□□□ -1.28
LINC01140-201ENST00000461990 C10orf55Q5SWW7 151 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 JPT2Q9H910 190 aa7.05□□□□□ -1.28
LINC01140-201ENST00000461990 J3QLI3 93 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 LINC01565O15544 149 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 NXPH1P58417 271 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 TSPEAR-AS2P59090 65 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 hADV29S1A0JD25 119 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 A0A0J9YX75 114 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 LST1O00453 97 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 FAM216BQ8N7L0 139 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 ZNRF1Q8ND25 227 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 FSCN3Q9NQT6 498 aa7.04□□□□□ -1.28
LINC01140-201ENST00000461990 INTS1Q8N201 2190 aaKnown RBP7.03□□□□□ -1.28
LINC01140-201ENST00000461990 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 PEMTQ9UBM1 199 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 DOCK7Q96N67 2140 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 IGHV1-69DA0A0B4J2H0 117 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 TRGV3P03979 118 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 DCANP1Q8TF63 244 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 RNF125Q96EQ8 232 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 SLC50A1Q9BRV3 221 aa7.03□□□□□ -1.28
LINC01140-201ENST00000461990 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.29
LINC01140-201ENST00000461990 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 C14orf178Q8N769 122 aaPredicted RBP7.02□□□□□ -1.29
LINC01140-201ENST00000461990 CFHR4Q92496 578 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 EPM2AB3EWF7 344 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 LY6LH3BQJ8 138 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 LHBP01229 141 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 IGKV1-17P01599 117 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 ICOSQ9Y6W8 199 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 J3QQQ9 107 aa7.02□□□□□ -1.29
LINC01140-201ENST00000461990 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
LINC01140-201ENST00000461990 PINLYPA6NC86 204 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
LINC01140-201ENST00000461990 CD59P13987 128 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 CCL8P80075 99 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 Q1RN00 199 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 VMA21Q3ZAQ7 101 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 MUSTN1Q8IVN3 82 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 NAV3Q8IVL0 2385 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 NDUFC2-KCTD14E9PQ53 114 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 I3L2K1 104 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 TIMM8AO60220 97 aaPredicted RBP7.01□□□□□ -1.29
LINC01140-201ENST00000461990 COX6CP09669 75 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 SUMO2P61956 95 aaKnown RBP7.01□□□□□ -1.29
LINC01140-201ENST00000461990 HCP5Q6MZN7 132 aa7.01□□□□□ -1.29
LINC01140-201ENST00000461990 RAI1Q7Z5J4 1906 aaPredicted RBP7.01□□□□□ -1.29
LINC01140-201ENST00000461990 DSCAMO60469 2012 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 TRAV26-2A0A0B4J265 109 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 MAGEA5P43359 124 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 ZNF491Q8N8L2 437 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 LINC00477Q96M19 166 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 PRR14LQ5THK1 2151 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 IGHV7-4-1A0A0J9YVY3 117 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 RNF223E7ERA6 249 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
LINC01140-201ENST00000461990 SERP2Q8N6R1 65 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 C8orf31Q8N9H6 132 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 H7C2G1 150 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 M0R381 172 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 LEPROTO15243 131 aa7□□□□□ -1.29
LINC01140-201ENST00000461990 C3orf36Q3SXR2 165 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms