RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
SF3A3-203ENST00000461869 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
SF3A3-203ENST00000461869 BTF3L4Q96K17 158 aa11.33□□□□□ -0.6
SF3A3-203ENST00000461869 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
SF3A3-203ENST00000461869 RPP21Q9H633 154 aaKnown RBP11.33□□□□□ -0.6
SF3A3-203ENST00000461869 V9GYV3 84 aa11.33□□□□□ -0.6
SF3A3-203ENST00000461869 HERC2O95714 4834 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 A8MTW9 85 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 UBE2CO00762 179 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
SF3A3-203ENST00000461869 DEFB1P60022 68 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 APRG1Q8IVJ8 170 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 IL36BQ9NZH7 164 aa11.32□□□□□ -0.6
SF3A3-203ENST00000461869 A8MWL6 223 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 H3BMM0 161 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 SH2D1AO60880 128 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 GPX1P07203 203 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
SF3A3-203ENST00000461869 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
SF3A3-203ENST00000461869 TRAV9-1A0A075B6T8 112 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 KLLNB2CW77 178 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 CDKN1BP46527 198 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 RPL19P84098 196 aaKnown RBP11.3□□□□□ -0.6
SF3A3-203ENST00000461869 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 STHQ8IWL8 128 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 PHLDA1Q8WV24 401 aaPredicted RBP11.3□□□□□ -0.6
SF3A3-203ENST00000461869 RNF183Q96D59 192 aa11.3□□□□□ -0.6
SF3A3-203ENST00000461869 KIR2DL5BA0A0G2JN68 375 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 KIR2DL5BA0A0G2JPC4 375 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 AMBPP02760 352 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 CRIP1P50238 77 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 Q6AWC8 147 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 KIR2DL5AQ8N109 375 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 KIR2DL5BQ8NHK3 375 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 TSKUQ8WUA8 353 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
SF3A3-203ENST00000461869 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
SF3A3-203ENST00000461869 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
SF3A3-203ENST00000461869 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
SF3A3-203ENST00000461869 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
SF3A3-203ENST00000461869 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
SF3A3-203ENST00000461869 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
SF3A3-203ENST00000461869 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
SF3A3-203ENST00000461869 C7orf71A4D174 169 aa11.27□□□□□ -0.61
SF3A3-203ENST00000461869 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
SF3A3-203ENST00000461869 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
SF3A3-203ENST00000461869 ELOBQ15370 118 aa11.27□□□□□ -0.61
SF3A3-203ENST00000461869 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
SF3A3-203ENST00000461869 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
SF3A3-203ENST00000461869 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 ORM1P02763 201 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 CXCL1P09341 107 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
SF3A3-203ENST00000461869 PRR9Q5T870 116 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
SF3A3-203ENST00000461869 YPEL4Q96NS1 127 aa11.26□□□□□ -0.61
SF3A3-203ENST00000461869 J3KRW8 73 aa11.25□□□□□ -0.61
SF3A3-203ENST00000461869 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-203ENST00000461869 ZNF124Q15973 351 aa11.25□□□□□ -0.61
SF3A3-203ENST00000461869 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
SF3A3-203ENST00000461869 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-203ENST00000461869 NEU1Q99519 415 aa11.25□□□□□ -0.61
SF3A3-203ENST00000461869 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
SF3A3-203ENST00000461869 M0R2Z0 102 aa11.24□□□□□ -0.61
SF3A3-203ENST00000461869 GFI1BQ5VTD9 330 aa11.24□□□□□ -0.61
SF3A3-203ENST00000461869 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
SF3A3-203ENST00000461869 C20orf144Q9BQM9 153 aa11.24□□□□□ -0.61
SF3A3-203ENST00000461869 COLCA2A8K830 154 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 INSP01308 110 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 FOXA3P55318 350 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-203ENST00000461869 TCL1AP56279 114 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 FAM3BP58499 235 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-203ENST00000461869 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-203ENST00000461869 FAM159AQ6UWV7 190 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 BORCS7Q96B45 105 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
SF3A3-203ENST00000461869 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 NANOS2P60321 138 aaKnown RBP11.22□□□□□ -0.61
SF3A3-203ENST00000461869 COX19Q49B96 90 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
SF3A3-203ENST00000461869 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 TYMSP04818 313 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 RAB5AP20339 215 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms