RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 C12orf54Q6X4T0 127 aa10.68□□□□□ -0.7
ERCC3-205ENST00000460485 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
ERCC3-205ENST00000460485 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
ERCC3-205ENST00000460485 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
ERCC3-205ENST00000460485 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
ERCC3-205ENST00000460485 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
ERCC3-205ENST00000460485 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
ERCC3-205ENST00000460485 NTF3P20783 257 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 KRTDAPP60985 99 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
ERCC3-205ENST00000460485 CTAG1AP78358 180 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 TWIST1Q15672 202 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 TM4SF20Q53R12 229 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 AP5S1Q9NUS5 200 aa10.67□□□□□ -0.7
ERCC3-205ENST00000460485 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 TMSB15BA0A087X1C1 80 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 CRXO43186 299 aaPredicted RBP10.66□□□□□ -0.7
ERCC3-205ENST00000460485 FA2HQ7L5A8 372 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 ZNF664Q8N3J9 261 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 PRELID3AQ96N28 172 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 PEMTQ9UBM1 199 aa10.66□□□□□ -0.7
ERCC3-205ENST00000460485 C3orf79P0CE67 100 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 LEPP41159 167 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 C20orf173Q96LM9 149 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 NDUFAF3Q9BU61 184 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 TMEM70Q9BUB7 260 aa10.65□□□□□ -0.7
ERCC3-205ENST00000460485 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 TCF21O43680 179 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 DUSP14O95147 198 aaKnown RBP10.64□□□□□ -0.71
ERCC3-205ENST00000460485 LEPROTL1O95214 131 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 CKS2P33552 79 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 PRSS3P2Q8NHM4 247 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
ERCC3-205ENST00000460485 D6R8Y8 96 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 TSPOP30536 169 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
ERCC3-205ENST00000460485 ASIPP42127 132 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 MRPL51Q4U2R6 128 aaKnown RBP10.63□□□□□ -0.71
ERCC3-205ENST00000460485 PET117Q6UWS5 81 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 FAM19A2Q8N3H0 131 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 MAP1LC3AQ9H492 121 aa10.63□□□□□ -0.71
ERCC3-205ENST00000460485 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
ERCC3-205ENST00000460485 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 KLLNB2CW77 178 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 LINC01619G3V211 115 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 K7EQG2 157 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 MAP1LC3CQ9BXW4 147 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
ERCC3-205ENST00000460485 IGHV4OR15-8A0A075B7B6 117 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 A0A087WW49 117 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 PPP1R17O96001 155 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 Q8N976 141 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
ERCC3-205ENST00000460485 PRSS47A8MTI9 375 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 FOXI2Q6ZQN5 318 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 DPF1Q92782 380 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
ERCC3-205ENST00000460485 DNAJC9-AS1A6NH13 148 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 K7EMI3 77 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 S100A4P26447 101 aaKnown RBP10.59□□□□□ -0.71
ERCC3-205ENST00000460485 SYNJ2BPP57105 145 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 PSMG4Q5JS54 123 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 MIEN1Q9BRT3 115 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
ERCC3-205ENST00000460485 A0A0J9YX75 114 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 M0R381 172 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 NXPH4O95158 308 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 HBDP02042 147 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 TDRG1Q3Y452 100 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-205ENST00000460485 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 AP1S3Q96PC3 154 aa10.58□□□□□ -0.72
ERCC3-205ENST00000460485 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 C7orf71A4D174 169 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 RNASE1P07998 156 aaKnown RBP10.57□□□□□ -0.72
ERCC3-205ENST00000460485 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 PRR9Q5T870 116 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 C3orf56Q8N813 242 aa10.57□□□□□ -0.72
ERCC3-205ENST00000460485 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms