RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 SPATA25Q9BR10 227 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 SH2D1AO60880 128 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 BMI1P35226 326 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 AAMDCQ9H7C9 122 aa12.18□□□□□ -0.46
CMTM3-203ENST00000460097 C2CD3Q4AC94 2353 aa12.17□□□□□ -0.46
CMTM3-203ENST00000460097 TMEM213A2RRL7 107 aa12.17□□□□□ -0.46
CMTM3-203ENST00000460097 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
CMTM3-203ENST00000460097 ZNF491Q8N8L2 437 aa12.17□□□□□ -0.46
CMTM3-203ENST00000460097 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
CMTM3-203ENST00000460097 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 NPYP01303 97 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 CEND1Q8N111 149 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 DKK2Q9UBU2 259 aa12.16□□□□□ -0.46
CMTM3-203ENST00000460097 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 K7EIM0 57 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 IGKCP01834 107 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 FXYD2P54710 66 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 HILS1P60008 231 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 Q6YL49 198 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 A0A1B0GV72 72 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 FCGR2BP31994 310 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-203ENST00000460097 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
CMTM3-203ENST00000460097 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-203ENST00000460097 DPM2O94777 84 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 GCSHP23434 173 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 SVIPQ8NHG7 77 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 RNF185Q96GF1 192 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 C17orf77Q96MU5 243 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 PRR25Q96S07 402 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
CMTM3-203ENST00000460097 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 BUB1B-PAK6H3BSN5 160 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 AZU1P20160 251 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
CMTM3-203ENST00000460097 TWIST1Q15672 202 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 NAA38Q9BRA0 125 aaKnown RBP12.13□□□□□ -0.47
CMTM3-203ENST00000460097 ESM1Q9NQ30 184 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 IGHV1-3A0A0C4DH29 117 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 GAGE12HA6NDE8 117 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-203ENST00000460097 ARPC1AQ92747 370 aa12.13□□□□□ -0.47
CMTM3-203ENST00000460097 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
CMTM3-203ENST00000460097 IGLL5B9A064 214 aa12.12□□□□□ -0.47
CMTM3-203ENST00000460097 TCTEX1D4Q5JR98 221 aa12.12□□□□□ -0.47
CMTM3-203ENST00000460097 DUX5Q96PT3 197 aa12.12□□□□□ -0.47
CMTM3-203ENST00000460097 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
CMTM3-203ENST00000460097 DNAJC9-AS1A6NH13 148 aa12.11□□□□□ -0.47
CMTM3-203ENST00000460097 DYNAPQ8N1N2 210 aa12.11□□□□□ -0.47
CMTM3-203ENST00000460097 TMEM86BQ8N661 226 aa12.11□□□□□ -0.47
CMTM3-203ENST00000460097 Q8N8P6 123 aa12.11□□□□□ -0.47
CMTM3-203ENST00000460097 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 M0R3E3 92 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
CMTM3-203ENST00000460097 RPL7P18124 248 aaKnown RBP12.1□□□□□ -0.47
CMTM3-203ENST00000460097 CNTFRP26992 372 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 LEPP41159 167 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 LCNL1Q6ZST4 164 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 ATP6V0BQ99437 205 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 GNG7O60262 68 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 IL4P05112 153 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 RPEQ96AT9 228 aa12.1□□□□□ -0.47
CMTM3-203ENST00000460097 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
CMTM3-203ENST00000460097 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
CMTM3-203ENST00000460097 TNFRSF6BO95407 300 aa12.09□□□□□ -0.47
CMTM3-203ENST00000460097 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
CMTM3-203ENST00000460097 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
CMTM3-203ENST00000460097 IGHV3-72A0A0B4J1Y9 119 aa12.08□□□□□ -0.48
CMTM3-203ENST00000460097 NPIPB5A8MRT5 1133 aa12.08□□□□□ -0.48
CMTM3-203ENST00000460097 H3BUX3 64 aa12.08□□□□□ -0.48
CMTM3-203ENST00000460097 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
CMTM3-203ENST00000460097 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
CMTM3-203ENST00000460097 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
CMTM3-203ENST00000460097 PRSS1P07477 247 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 RNASE1P07998 156 aaKnown RBP12.07□□□□□ -0.48
CMTM3-203ENST00000460097 PLNP26678 52 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 TTC9CQ8N5M4 171 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 C18orf15Q96N68 181 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 FBXL15Q9H469 300 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 NHP2Q9NX24 153 aaKnown RBP12.07□□□□□ -0.48
CMTM3-203ENST00000460097 ATRQ13535 2644 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 TRAV12-1A0A0B4J245 112 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 SMKR1H3BMG3 65 aa12.07□□□□□ -0.48
CMTM3-203ENST00000460097 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms