RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
CD28-203ENST00000458610 SULT1A2P50226 295 aa11.38□□□□□ -0.59
CD28-203ENST00000458610 CSMD3Q7Z407 3707 aa11.38□□□□□ -0.59
CD28-203ENST00000458610 TRAV34A0A0B4J273 112 aa11.37□□□□□ -0.59
CD28-203ENST00000458610 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
CD28-203ENST00000458610 POM121L12Q8N7R1 296 aa11.37□□□□□ -0.59
CD28-203ENST00000458610 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
CD28-203ENST00000458610 C8orf49Q96NF6 230 aa11.37□□□□□ -0.59
CD28-203ENST00000458610 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 A0A1B0GV50 99 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 FABP5P3A8MUU1 101 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 H3BNG1 76 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 AKR1C3P42330 323 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 SLAQ13239 276 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 RNF212Q495C1 297 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
CD28-203ENST00000458610 GNRH2O43555 120 aa11.35□□□□□ -0.59
CD28-203ENST00000458610 Q86TA4 180 aa11.35□□□□□ -0.59
CD28-203ENST00000458610 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
CD28-203ENST00000458610 IGHV3-16A0A0C4DH30 117 aa11.34□□□□□ -0.59
CD28-203ENST00000458610 M0R2P5 195 aa11.34□□□□□ -0.59
CD28-203ENST00000458610 NUDT3O95989 172 aa11.34□□□□□ -0.59
CD28-203ENST00000458610 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
CD28-203ENST00000458610 FAM3BP58499 235 aaPredicted RBP11.34□□□□□ -0.59
CD28-203ENST00000458610 RASL10AQ92737 203 aa11.34□□□□□ -0.59
CD28-203ENST00000458610 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
CD28-203ENST00000458610 IFNA1P01562 189 aa11.33□□□□□ -0.6
CD28-203ENST00000458610 TYMSP04818 313 aa11.33□□□□□ -0.6
CD28-203ENST00000458610 COX8CQ7Z4L0 72 aa11.33□□□□□ -0.6
CD28-203ENST00000458610 GNG13Q9P2W3 67 aa11.33□□□□□ -0.6
CD28-203ENST00000458610 HOXA5P20719 270 aa11.32□□□□□ -0.6
CD28-203ENST00000458610 TAGLN2P37802 199 aaKnown RBP11.32□□□□□ -0.6
CD28-203ENST00000458610 CCL18P55774 89 aa11.32□□□□□ -0.6
CD28-203ENST00000458610 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
CD28-203ENST00000458610 LTAP01374 205 aa11.31□□□□□ -0.6
CD28-203ENST00000458610 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
CD28-203ENST00000458610 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
CD28-203ENST00000458610 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 A0A0J9YY99 117 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 CIDEAO60543 219 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 ORM1P02763 201 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
CD28-203ENST00000458610 BLOC1S1P78537 153 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 CCL20P78556 96 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 C11orf21Q9P2W6 132 aa11.3□□□□□ -0.6
CD28-203ENST00000458610 PAX4O43316 350 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 ASIPP42127 132 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 OR4C5Q8NGB2 326 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 PTH2Q96A98 100 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
CD28-203ENST00000458610 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
CD28-203ENST00000458610 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
CD28-203ENST00000458610 PDE6DO43924 150 aa11.28□□□□□ -0.6
CD28-203ENST00000458610 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CD28-203ENST00000458610 B4DEV8 164 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 C9JCJ5 164 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
CD28-203ENST00000458610 FHL2Q14192 279 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 ZNF674Q2M3X9 581 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 C9orf85Q96MD7 179 aa11.27□□□□□ -0.61
CD28-203ENST00000458610 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 SH2D1AO60880 128 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 CRIP1P50238 77 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 CRYBA4P53673 196 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 NDUFA5Q16718 116 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 PIK3CD-AS1Q5SR53 167 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 ALKAL2Q6UX46 152 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 RYR3Q15413 4870 aa11.26□□□□□ -0.61
CD28-203ENST00000458610 RYR2Q92736 4967 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 KRBOX1C9JBD0 128 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 BCL2P10415 239 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
CD28-203ENST00000458610 MRPL23Q16540 153 aaKnown RBP11.25□□□□□ -0.61
CD28-203ENST00000458610 DNLZQ5SXM8 178 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 PCNPQ8WW12 178 aaKnown RBP11.25□□□□□ -0.61
CD28-203ENST00000458610 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
CD28-203ENST00000458610 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
CD28-203ENST00000458610 M0R036 132 aa11.24□□□□□ -0.61
CD28-203ENST00000458610 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
CD28-203ENST00000458610 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
CD28-203ENST00000458610 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
CD28-203ENST00000458610 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
CD28-203ENST00000458610 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
CD28-203ENST00000458610 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
CD28-203ENST00000458610 A0A096LPF7 62 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 RS1O15537 224 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 SFTA3P0C7M3 94 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 SMIM12Q96EX1 92 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms