RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 UBE2L3P68036 154 aaKnown RBP6.94□□□□□ -1.3
HDLBP-227ENST00000458564 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
HDLBP-227ENST00000458564 TRAV21A0A0B4J279 112 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 CIDEAO60543 219 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 TYMSP04818 313 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 KHDC3LQ587J8 217 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 LELP1Q5T871 98 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 SLC25A29Q8N8R3 303 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 Q9HAA7 133 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 NAGKQ9UJ70 344 aa6.93□□□□□ -1.3
HDLBP-227ENST00000458564 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 FBLL1A6NHQ2 334 aaKnown RBP6.92□□□□□ -1.3
HDLBP-227ENST00000458564 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 GNRH2O43555 120 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 RHOHQ15669 191 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 KCNS1Q96KK3 526 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 ATP5SQ99766 215 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 PRADC1Q9BSG0 188 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 SDF2L1Q9HCN8 221 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 OTORQ9NRC9 128 aa6.92□□□□□ -1.3
HDLBP-227ENST00000458564 TAS2R45P59539 299 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 WFDC2Q14508 124 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 CFAP126Q5VTH2 177 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 CCDC32Q9BV29 185 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 NMES1Q9C002 83 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 OR5AC2Q9NZP5 309 aa6.91□□□□□ -1.3
HDLBP-227ENST00000458564 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 H0YIZ8 118 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 RS1O15537 224 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 FAM74A1Q5RGS3 127 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 CMTM2Q8TAZ6 248 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 ASB13Q8WXK3 278 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 TVP23CQ96ET8 276 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 HYLS1Q96M11 299 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 TREM1Q9NP99 234 aa6.9□□□□□ -1.3
HDLBP-227ENST00000458564 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 FAM240BA0A1B0GVZ2 78 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 PGPA6NDG6 321 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 F6UZH7 168 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 LINC00694P0DN24 101 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 MGST1P10620 155 aaKnown RBP6.89□□□□□ -1.31
HDLBP-227ENST00000458564 FFAR4Q5NUL3 377 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 PQLC2Q6ZP29 291 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 GOLT1AQ6ZVE7 132 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 PTH2Q96A98 100 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 C9orf85Q96MD7 179 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 SH3BGRL3Q9H299 93 aa6.89□□□□□ -1.31
HDLBP-227ENST00000458564 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 TRAV8-1A0A0A6YYK1 113 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
HDLBP-227ENST00000458564 CYCSP99999 105 aaKnown RBP6.88□□□□□ -1.31
HDLBP-227ENST00000458564 ASAH1Q13510 395 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 LRRC37A5PQ49AS3 106 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 ATP6V0E2Q8NHE4 81 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 RPH3ALQ9UNE2 315 aa6.88□□□□□ -1.31
HDLBP-227ENST00000458564 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 SIX6O95475 246 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 ZNF506Q5JVG8 444 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 PIK3CD-AS1Q5SR53 167 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 Q8N3U1 123 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 NDFIP1Q9BT67 221 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 HSPB11Q9Y547 144 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
HDLBP-227ENST00000458564 IGHV3-73A0A0B4J1V6 119 aa6.86□□□□□ -1.31
HDLBP-227ENST00000458564 TAAR5O14804 337 aa6.86□□□□□ -1.31
HDLBP-227ENST00000458564 RNASE3P12724 160 aaKnown RBP6.86□□□□□ -1.31
HDLBP-227ENST00000458564 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
HDLBP-227ENST00000458564 ZFP2Q6ZN57 461 aa6.86□□□□□ -1.31
HDLBP-227ENST00000458564 SYT8Q8NBV8 401 aa6.86□□□□□ -1.31
HDLBP-227ENST00000458564 PPP1R1CQ8WVI7 109 aa6.86□□□□□ -1.31
HDLBP-227ENST00000458564 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
HDLBP-227ENST00000458564 A0A087WWC5 75 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 LECT2O14960 151 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDLBP-227ENST00000458564 OXTP01178 125 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 PET100P0DJ07 73 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 H2BFSP57053 126 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 GNG5P63218 68 aa6.85□□□□□ -1.31
HDLBP-227ENST00000458564 ACOT6Q3I5F7 207 aaPredicted RBP6.85□□□□□ -1.31
HDLBP-227ENST00000458564 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms