RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 LINC00477Q96M19 166 aa15.66■□□□□ 0.1
CRAT-207ENST00000458362 JMJD8Q96S16 334 aa15.66■□□□□ 0.1
CRAT-207ENST00000458362 A6NDX4 124 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 IGHG2P01859 326 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 KIR3DS1Q14943 382 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 A6NDN8 102 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 H3BRM9 83 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 BLCAPP62952 87 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 GTSCR1Q86UQ5 136 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 OR10J6PQ8NGY7 276 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 NAA38Q9BRA0 125 aaKnown RBP15.65■□□□□ 0.1
CRAT-207ENST00000458362 PKD1L2Q7Z442 2459 aa15.65■□□□□ 0.1
CRAT-207ENST00000458362 TMEM8BA6NDV4 472 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 F6UB75 175 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 ATP5LO75964 103 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 VPS13CQ709C8 3753 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 OVOL1O14753 267 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 DPM2O94777 84 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 PF4V1P10720 104 aa15.64■□□□□ 0.09
CRAT-207ENST00000458362 IGKV3-7A0A075B6H7 116 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 C9orf118A6NHY6 69 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 M0R381 172 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 TM4SF20Q53R12 229 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 CCL19Q99731 98 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 BRI3O95415 125 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 MRAP2Q96G30 205 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 USMG5Q96IX5 58 aa15.63■□□□□ 0.09
CRAT-207ENST00000458362 MRPL35Q9NZE8 188 aaKnown RBP15.63■□□□□ 0.09
CRAT-207ENST00000458362 IGHV4-30-2A0A087WSY4 118 aa15.62■□□□□ 0.09
CRAT-207ENST00000458362 TRAV21A0A0B4J279 112 aa15.62■□□□□ 0.09
CRAT-207ENST00000458362 RPL11P62913 178 aaKnown RBP15.62■□□□□ 0.09
CRAT-207ENST00000458362 ANXA2RQ3ZCQ2 193 aa15.62■□□□□ 0.09
CRAT-207ENST00000458362 FAM19A4Q96LR4 140 aa15.62■□□□□ 0.09
CRAT-207ENST00000458362 ZC2HC1BQ5TFG8 222 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 MYOZ3Q8TDC0 251 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 SMIM2Q9BVW6 85 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 CST9LQ9H4G1 147 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 TMEM160Q9NX00 188 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 SMPXQ9UHP9 88 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 H3BUA1 57 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 H3BUT2 72 aa15.61■□□□□ 0.09
CRAT-207ENST00000458362 RNASE4P34096 147 aaKnown RBP15.61■□□□□ 0.09
CRAT-207ENST00000458362 EDN2P20800 178 aa15.6■□□□□ 0.09
CRAT-207ENST00000458362 SRSF1Q07955 248 aaKnown RBP eCLIP15.6■□□□□ 0.09
CRAT-207ENST00000458362 RASL10AQ92737 203 aa15.6■□□□□ 0.09
CRAT-207ENST00000458362 RAB37Q96AX2 223 aa15.6■□□□□ 0.09
CRAT-207ENST00000458362 SPOCK3Q9BQ16 436 aa15.6■□□□□ 0.09
CRAT-207ENST00000458362 SPG11Q96JI7 2443 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 NDUFS8O00217 210 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 ASIPP42127 132 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 PSMG4Q5JS54 123 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 UFSP1Q6NVU6 142 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 C14orf178Q8N769 122 aaPredicted RBP15.59■□□□□ 0.09
CRAT-207ENST00000458362 RPL39LQ96EH5 51 aaKnown RBP15.59■□□□□ 0.09
CRAT-207ENST00000458362 RHPN1-AS1Q9BWJ2 59 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 GNRH2O43555 120 aa15.59■□□□□ 0.09
CRAT-207ENST00000458362 S100A4P26447 101 aaKnown RBP15.59■□□□□ 0.09
CRAT-207ENST00000458362 CFAP46Q8IYW2 2715 aa15.58■□□□□ 0.09
CRAT-207ENST00000458362 A0A0G2JLM5 398 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 GAGE10A6NGK3 116 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 SRD5A1P18405 259 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 CDKN1BP46527 198 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 CLEC2AQ6UVW9 174 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 AP1S3Q96PC3 154 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 HIGD1BQ9P298 99 aa15.58■□□□□ 0.08
CRAT-207ENST00000458362 A0A087WX48 190 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 GAGE12BA1L429 117 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 IGLV1-40P01703 118 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 ATP5J2P56134 94 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 CHAC1Q9BUX1 264 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 COL12A1Q99715 3063 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 RNF223E7ERA6 249 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 AVPP01185 164 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 FXYD2P54710 66 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 RNF151Q2KHN1 245 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 DPH3P1Q9H4G8 78 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 PHLDA3Q9Y5J5 127 aa15.57■□□□□ 0.08
CRAT-207ENST00000458362 TRBV25-1A0A075B6N4 114 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 OCIAD2Q56VL3 154 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 APRG1Q8IVJ8 170 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 MAPKAPK5-AS1Q8N8E1 139 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 MSMBP08118 114 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 RNASE3P12724 160 aaKnown RBP15.56■□□□□ 0.08
CRAT-207ENST00000458362 GCSHP23434 173 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 SUMO2P61956 95 aaKnown RBP15.56■□□□□ 0.08
CRAT-207ENST00000458362 C21orf62-AS1Q17RA5 79 aa15.56■□□□□ 0.08
CRAT-207ENST00000458362 TMEM95Q3KNT9 176 aa15.55■□□□□ 0.08
CRAT-207ENST00000458362 DOPEY1Q5JWR5 2465 aa15.55■□□□□ 0.08
CRAT-207ENST00000458362 MGPP08493 103 aa15.55■□□□□ 0.08
CRAT-207ENST00000458362 CFHR3Q02985 330 aa15.55■□□□□ 0.08
CRAT-207ENST00000458362 MUC4Q99102 2169 aa15.54■□□□□ 0.08
CRAT-207ENST00000458362 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.54■□□□□ 0.08
CRAT-207ENST00000458362 PIEZO1Q92508 2521 aa15.54■□□□□ 0.08
CRAT-207ENST00000458362 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.54■□□□□ 0.086e-7■■■■□ 21.3
CRAT-207ENST00000458362 K7EP34 96 aa15.54■□□□□ 0.08
CRAT-207ENST00000458362 PCP4P48539 62 aa15.54■□□□□ 0.08
CRAT-207ENST00000458362 DAZ1Q9NQZ3 744 aaKnown RBP15.54■□□□□ 0.08
CRAT-207ENST00000458362 MED14OSP0DP75 135 aa15.53■□□□□ 0.08
CRAT-207ENST00000458362 TOMM6Q96B49 74 aa15.53■□□□□ 0.08
CRAT-207ENST00000458362 C20orf78Q9BR46 151 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms