RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.85
DEPDC1-202ENST00000456315 FOXC2Q99958 501 aa3.46□□□□□ -1.85
DEPDC1-202ENST00000456315 MSRB2Q9Y3D2 182 aa3.46□□□□□ -1.85
DEPDC1-202ENST00000456315 TRGV5A0A0B4J1U4 118 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 CCL8P80075 99 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 DLX4Q92988 240 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 SLC25A39Q9BZJ4 359 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 PVRIGQ6DKI7 326 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 PDPNQ86YL7 162 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 THAP8Q8NA92 274 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 M0QXV9 152 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 SCGB1A1P11684 91 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 DTX2Q86UW9 622 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 TTC9CQ8N5M4 171 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 OR1L8Q8NGR8 309 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 OPRPNQ99935 248 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 RTL8AQ9BWD3 113 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 JPT2Q9H910 190 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 CLPSL1A2RUU4 121 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 CCL11P51671 97 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 FA2HQ7L5A8 372 aa3.46□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV1-18A0A0C4DH31 117 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 A0A0J9YY99 117 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 OOSP1A8MZH6 123 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 COX7A2P2O60397 106 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 NDUFA3O95167 84 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 TNFRSF6BO95407 300 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 CYB561P49447 251 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 NDUFV3P56181 108 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 C9orf106Q8NAJ2 232 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 OR4X2Q8NGF9 303 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 DUSP23Q9BVJ7 150 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 PRSS1P07477 247 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 IL11RAQ14626 422 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 RPL39LQ96EH5 51 aaKnown RBP3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 FANCD2OSQ96PS1 177 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 A8MZ25 164 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 PLP2Q04941 152 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 ERCC8Q13216 396 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 RAB30Q15771 203 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 VKORC1Q9BQB6 163 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 CNFNQ9BYD5 112 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 LOC107984156A0A0G2JMH3 177 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 I3L2K1 104 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 THBDP07204 575 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 CKS2P33552 79 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 LEPP41159 167 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 ARL17AQ8IVW1 177 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 RPEQ96AT9 228 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 FAM110AQ9BQ89 295 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 PRADC1Q9BSG0 188 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 LINC00574Q9H8X3 128 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 VPREB3Q9UKI3 123 aa3.45□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 FABP5P3A8MUU1 101 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 MRPL23Q16540 153 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 Q8IYB0 196 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 DYNAPQ8N1N2 210 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 RNF182Q8N6D2 247 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 LINC01587Q99440 93 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 SPRY3O43610 288 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 SH2D1AO60880 128 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 LY6HO94772 140 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 RPL39P62891 51 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 Q8N1Y9 231 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 ZNRF2Q8NHG8 242 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 RAX2Q96IS3 184 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 AP1S3Q96PC3 154 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 GAFA1Q96PS6 74 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-49A0A0A0MS15 119 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 TM4SF5O14894 197 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 IGLV1-44P01699 117 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 SLC25A16P16260 332 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 GFRALQ6UXV0 394 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 TMEM167AQ8TBQ9 72 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 GFRA4Q9GZZ7 299 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 LYNX1G3V0Z9 82 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 LYNX1P0DP58 116 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 CXCL12P48061 93 aa3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 MAFAQ8NHW3 353 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 NTN5Q8WTR8 489 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-202ENST00000456315 ADARB2-AS1A8MUL3 147 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 NDUFA11Q86Y39 141 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 POM121L12Q8N7R1 296 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 SMCR5Q8TEV8 140 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 FBXL15Q9H469 300 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 HOXA3O43365 443 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 DUSP14O95147 198 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 CRYGBP07316 175 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 IGFBP4P22692 258 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 ERVK-16P61578 105 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 CFHR4Q92496 578 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 FRAS1Q86XX4 4008 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 IGLV3-9A0A075B6K5 115 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms