RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NDUFV3P56181 108 aaKnown RBP4.19□□□□□ -1.74
CSMD3-204ENST00000455883 PNRC2Q9NPJ4 139 aaKnown RBP4.19□□□□□ -1.74
CSMD3-204ENST00000455883 G3V4G9 280 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 DEFB123Q8N688 67 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 ZNF747Q9BV97 191 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 TP53TG1Q9Y2A0 90 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 ELANEP08246 267 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 C17orf82Q86X59 251 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-204ENST00000455883 CELA3AP09093 270 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 CSRP2Q16527 193 aa4.19□□□□□ -1.74
CSMD3-204ENST00000455883 ITLN2Q8WWU7 325 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-204ENST00000455883 IGLC7A0M8Q6 106 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 SNRPCP09234 159 aaKnown RBP4.18□□□□□ -1.74
CSMD3-204ENST00000455883 GFI1BQ5VTD9 330 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 LSM4Q9Y4Z0 139 aaKnown RBP4.18□□□□□ -1.74
CSMD3-204ENST00000455883 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 H3BRN7 92 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 C11orf86A6NJI1 115 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 SPACA3Q8IXA5 215 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 FOXF2Q12947 444 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 IGFL3Q6UXB1 125 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 TM2D2Q9BX73 214 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 SETXQ7Z333 2677 aaKnown RBP4.18□□□□□ -1.74
CSMD3-204ENST00000455883 TRAV4A0A0B4J268 109 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 IGKV1D-13A0A0B4J2D9 117 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 IGKV1-13P0DP09 117 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 PLAURQ03405 335 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 C12orf74Q32Q52 190 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 IGHV1OR15-1A0A075B7D0 117 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 IGHV3-64DA0A0J9YX35 117 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 ADCYAP1P18509 176 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 LPAL2Q16609 132 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 PRR30Q53SZ7 412 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-204ENST00000455883 FAM219BQ5XKK7 198 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 CLEC19AQ6UXS0 136 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 RPL15P61313 204 aaKnown RBP4.18□□□□□ -1.74
CSMD3-204ENST00000455883 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 CRIPAKQ8N1N5 446 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 TRAV13-1A0A0B4J241 112 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 FOXI1Q12951 378 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 CDCP2Q5VXM1 449 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 SLC25A45Q8N413 288 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 C1orf159Q96HA4 380 aa4.18□□□□□ -1.74
CSMD3-204ENST00000455883 TRBV10-2A0A0K0K1G8 114 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 METRNQ9UJH8 293 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 SS18L2Q9UHA2 77 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 ICOSQ9Y6W8 199 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 B5MCH6 92 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 E9PLD3 99 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 STPG1Q5TH74 334 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 IGLL1P15814 213 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 MDKP21741 143 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-204ENST00000455883 A0A1W2PR77 199 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 NBL1P41271 181 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 C7orf69Q9H7B7 122 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 TRAV3A0A0B4J244 114 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 J3KRW8 73 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 ZNF292O60281 2723 aa4.17□□□□□ -1.74
CSMD3-204ENST00000455883 MRPL36Q9P0J6 103 aaKnown RBP4.17□□□□□ -1.74
CSMD3-204ENST00000455883 BUB3O43684 328 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 IGF2-ASQ6U949 168 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 LYPD3O95274 346 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 IGLV3-1P01715 115 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 C14orf178Q8N769 122 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-204ENST00000455883 IGHV1-2P23083 117 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 COX17Q14061 63 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 SPRY4Q9C004 299 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 COL4A1P02462 1669 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 MRGPRG-AS1Q2M3A8 158 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 PRR19A6NJB7 356 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 PSMB8P28062 276 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 hDV102S1A0JD36 115 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 GFI1Q99684 422 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 NDUFA7O95182 113 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 PROP1O75360 226 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 IGLC1P0CG04 106 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 Q6ZSR3 168 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 SCRT1Q9BWW7 348 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 ZNF71Q9NQZ8 489 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-204ENST00000455883 TRGV1A0A0A0MS02 117 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 TFPI2P48307 235 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 Q6ZUT4 128 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 GGNQ86UU5 652 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 LRRC75A-AS1Q8N1F1 130 aa4.16□□□□□ -1.74
CSMD3-204ENST00000455883 TRAV40A0A0B4J280 105 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 WIPF3A6NGB9 483 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 CR1LQ2VPA4 569 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 C16orf74Q96GX8 76 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 CR1P17927 2039 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 TRBV12-3P01733 135 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 NTF4P34130 210 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 INSL3P51460 131 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 SRSF3P84103 164 aaKnown RBP4.15□□□□□ -1.74
CSMD3-204ENST00000455883 DPH3Q96FX2 82 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms