RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 WNK1Q9H4A3 2382 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 OR8A1Q8NGG7 326 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 PMCHL2Q9BQD1 86 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 TMEM70Q9BUB7 260 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 OVOL1O14753 267 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 NPYP01303 97 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 SPANXN1Q5VSR9 72 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 LINC00477Q96M19 166 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 SIGLEC8Q9NYZ4 499 aa8.9□□□□□ -0.98
VTA1-203ENST00000452973 GATA1P15976 413 aaPredicted RBP8.89□□□□□ -0.99
VTA1-203ENST00000452973 CUBNO60494 3623 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 S100A4P26447 101 aaKnown RBP8.89□□□□□ -0.99
VTA1-203ENST00000452973 ZFAND2AQ8N6M9 145 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 AGRNO00468 2067 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 HOXD3P31249 432 aaPredicted RBP8.89□□□□□ -0.99
VTA1-203ENST00000452973 PSMG4Q5JS54 123 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 HECTD1Q9ULT8 2610 aa8.89□□□□□ -0.99
VTA1-203ENST00000452973 M0R381 172 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 OR5AL1P0C617 328 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 RAB4AP20338 218 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 C11orf44Q8N8P7 122 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 MS4A6AQ9H2W1 248 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 TRAV26-2A0A0B4J265 109 aa8.88□□□□□ -0.99
VTA1-203ENST00000452973 FASNP49327 2511 aaKnown RBP8.88□□□□□ -0.99
VTA1-203ENST00000452973 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 K7EMT4 169 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
VTA1-203ENST00000452973 SRSF2Q01130 221 aaKnown RBP8.87□□□□□ -0.99
VTA1-203ENST00000452973 KLHDC1Q8N7A1 406 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 J3QKU1 62 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 EREGO14944 169 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 GNRH2O43555 120 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 PLA2G2AP14555 144 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 ID1P41134 155 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 SLURP1P55000 103 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 BATFQ16520 125 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 MAP1LC3CQ9BXW4 147 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 ELANEP08246 267 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 PSMG3-AS1Q96PY0 264 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
VTA1-203ENST00000452973 OR4C46A6NHA9 309 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 UBE2E2Q96LR5 201 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 U3KQK5 164 aa8.86□□□□□ -0.99
VTA1-203ENST00000452973 HSPB8Q9UJY1 196 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 hDV102S1A0JD36 115 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 SNHG12Q9BXW3 62 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 PDZD2O15018 2839 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 GCN1Q92616 2671 aaKnown RBP8.85□□□□□ -0.99
VTA1-203ENST00000452973 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 TCF21O43680 179 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 PHLDA3Q9Y5J5 127 aa8.85□□□□□ -0.99
VTA1-203ENST00000452973 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
VTA1-203ENST00000452973 TNFRSF6BO95407 300 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 TCTEX1D4Q5JR98 221 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 OR11H1Q8NG94 326 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 C20orf202A1L168 122 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 IGLL1P15814 213 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 ASIPP42127 132 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
VTA1-203ENST00000452973 Q6ZN92 141 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 C18orf15Q96N68 181 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 MAP1LC3AQ9H492 121 aa8.84□□□□□ -0.99
VTA1-203ENST00000452973 TRAV9-2A0A087WT02 112 aa8.83□□□□□ -1
VTA1-203ENST00000452973 A0A096LNJ9 63 aa8.83□□□□□ -1
VTA1-203ENST00000452973 A0A1W2PRX2 142 aa8.83□□□□□ -1
VTA1-203ENST00000452973 TCTAP57738 103 aa8.83□□□□□ -1
VTA1-203ENST00000452973 DPF1Q92782 380 aa8.83□□□□□ -1
VTA1-203ENST00000452973 ZNF747Q9BV97 191 aa8.83□□□□□ -1
VTA1-203ENST00000452973 C14orf178Q8N769 122 aaPredicted RBP8.83□□□□□ -1
VTA1-203ENST00000452973 YAE1D1Q9NRH1 226 aa8.83□□□□□ -1
VTA1-203ENST00000452973 M0R143 59 aa8.83□□□□□ -1
VTA1-203ENST00000452973 IGLC3P0DOY3 106 aa8.83□□□□□ -1
VTA1-203ENST00000452973 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
VTA1-203ENST00000452973 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
VTA1-203ENST00000452973 NOTCH3Q9UM47 2321 aa8.82□□□□□ -1
VTA1-203ENST00000452973 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
VTA1-203ENST00000452973 PPBPP02775 128 aa8.82□□□□□ -1
VTA1-203ENST00000452973 MGPP08493 103 aa8.82□□□□□ -1
VTA1-203ENST00000452973 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
VTA1-203ENST00000452973 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
VTA1-203ENST00000452973 UQCR10Q9UDW1 63 aa8.81□□□□□ -1
VTA1-203ENST00000452973 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
VTA1-203ENST00000452973 SNAI2O43623 268 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms