RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GAGE7O76087 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 GAGE12FP0CL80 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 GAGE12GP0CL81 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 GAGE12IP0CL82 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 GAGE4Q13068 117 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 ERCC8Q13216 396 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 SH2D1AO60880 128 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
COL27A1-202ENST00000451716 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
COL27A1-202ENST00000451716 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 HAX1O00165 279 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 BUB3O43684 328 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 CSN3P07498 182 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 EBLN2Q6P2I7 272 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 SH2D6Q7Z4S9 175 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 C20orf78Q9BR46 151 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 MOB4Q9Y3A3 225 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 ANKRD17O75179 2603 aaKnown RBP9.3□□□□□ -0.92
COL27A1-202ENST00000451716 FABP2P12104 132 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 WFDC2Q14508 124 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 PRR25Q96S07 402 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 TRAV41A0A0B4J266 112 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
COL27A1-202ENST00000451716 INSL3P51460 131 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
COL27A1-202ENST00000451716 A6NDN8 102 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 LYZL1Q6UWQ5 148 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 Q6ZS46 218 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
COL27A1-202ENST00000451716 TMEM213A2RRL7 107 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 H3BUX3 64 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 FAM162BQ5T6X4 162 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
COL27A1-202ENST00000451716 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 AVPP01185 164 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 TRGV3P03979 118 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 BLCAPP62952 87 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 FOXE3Q13461 319 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.28□□□□□ -0.92
COL27A1-202ENST00000451716 IGHV3-11P01762 117 aa9.27□□□□□ -0.92
COL27A1-202ENST00000451716 XGP55808 180 aa9.27□□□□□ -0.92
COL27A1-202ENST00000451716 RIGQ13278 110 aa9.27□□□□□ -0.92
COL27A1-202ENST00000451716 CDIP1Q9H305 208 aa9.27□□□□□ -0.92
COL27A1-202ENST00000451716 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
COL27A1-202ENST00000451716 Q6ZUT4 128 aa9.27□□□□□ -0.93
COL27A1-202ENST00000451716 SYT8Q8NBV8 401 aa9.27□□□□□ -0.93
COL27A1-202ENST00000451716 MAPK1IP1LQ8NDC0 245 aa9.27□□□□□ -0.93
COL27A1-202ENST00000451716 TRBV7-1A0A0A6YYK4 115 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 F8WDY8 70 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 MSMBP08118 114 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 DUX5Q96PT3 197 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 METTL26Q96S19 204 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 UNQ9165/PRO28630Q6UXU0 137 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 MCRIP2Q9BUT9 160 aaKnown RBP9.26□□□□□ -0.93
COL27A1-202ENST00000451716 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 ORM1P02763 201 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 IL17RELQ6ZVW7 336 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
COL27A1-202ENST00000451716 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
COL27A1-202ENST00000451716 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 AMN1Q8IY45 258 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 A1L4Q6 167 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 SAMD5Q5TGI4 173 aa9.25□□□□□ -0.93
COL27A1-202ENST00000451716 LOC389332A0A1B0GUA5 103 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 Q6ZQT7 251 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 TEX29Q8N6K0 151 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 TMEM190Q8WZ59 177 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
COL27A1-202ENST00000451716 MSRB1Q9NZV6 116 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 PRSS29PA6NIE9 313 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
COL27A1-202ENST00000451716 NAV2Q8IVL1 2488 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 D6R8Y8 96 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 SMAD7O15105 426 aaKnown RBP9.23□□□□□ -0.93
COL27A1-202ENST00000451716 TWIST1Q15672 202 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 MXRA5Q9NR99 2828 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
COL27A1-202ENST00000451716 F8W1H4 67 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms