RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 EBI3Q14213 229 aa5.84□□□□□ -1.47
TRIM49C-201ENST00000448984 LYZL1Q6UWQ5 148 aa5.84□□□□□ -1.47
TRIM49C-201ENST00000448984 Q8N8P6 123 aa5.84□□□□□ -1.47
TRIM49C-201ENST00000448984 COL12A1Q99715 3063 aa5.84□□□□□ -1.48
TRIM49C-201ENST00000448984 IGKV1D-17A0A075B6S4 117 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 MBD3L3A6NE82 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 H7C1H1 209 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 SUB1P53999 127 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 RPL39P5Q59GN2 51 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 MBD3L2Q8NHZ7 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 IGFBPL1Q8WX77 278 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 SCNM1Q9BWG6 230 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 ZNRD1Q9P1U0 126 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 ARFGEF3Q5TH69 2177 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 DSCAMO60469 2012 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 IGKV1D-37A0A075B6S9 117 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 ORM1P02763 201 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 CRYGDP07320 174 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 CD3EP07766 207 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 CRYGAP11844 174 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 SRSF9Q13242 221 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 SFTA2Q6UW10 78 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 GOLT1AQ6ZVE7 132 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 FLYWCH2Q96CP2 140 aaKnown RBP5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 DUX3Q96PT4 197 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 GNG12Q9UBI6 72 aa5.83□□□□□ -1.48
TRIM49C-201ENST00000448984 ASH1LQ9NR48 2969 aaKnown RBP5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TPRP12270 2363 aaKnown RBP5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TRBV10-2A0A0K0K1G8 114 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 RBAKDNA6NC62 111 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 ZNF815PA8K554 130 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 SMKR1H3BMG3 65 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 PRDX2P32119 198 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 ERHP84090 104 aaKnown RBP5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 LINC01620Q4KN68 170 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 IGFL3Q6UXB1 125 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 C1orf229Q6ZS94 237 aaPredicted RBP5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TRPT1Q86TN4 253 aaKnown RBP5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TMEM14CQ9P0S9 112 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 PRO1854Q9UHT4 67 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 PLAUP00749 431 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 COX7CP15954 63 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 SLC25A16P16260 332 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 TMEM258P61165 79 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 PMVKQ15126 192 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 DEFB121Q5J5C9 76 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 DTX2Q86UW9 622 aa5.82□□□□□ -1.48
TRIM49C-201ENST00000448984 CACNA1AO00555 2505 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 COL6A6A6NMZ7 2263 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 A0A0G2JNJ9 132 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 H3BT86 120 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 NDUFA3O95167 84 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 COX6B1P14854 86 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 ZNF134P52741 427 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 EFNA4P52798 201 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 DLX6P56179 175 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 CCL8P80075 99 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 MLANAQ16655 118 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 Q8NA96 180 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 Q9UFV3 132 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 CFAP46Q8IYW2 2715 aa5.81□□□□□ -1.48
TRIM49C-201ENST00000448984 MRPS12O15235 138 aaKnown RBP5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 ACYP1P07311 99 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 CFC1P0CG37 223 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 ZNF56Q15929 161 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 RNF185Q96GF1 192 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 RAI1Q7Z5J4 1906 aaPredicted RBP5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 TEX49A0A1B0GTD5 131 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 OVOL1O14753 267 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 PRB3Q04118 309 aaPredicted RBP5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 LAGE3Q14657 143 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 FAM216BQ8N7L0 139 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 CCL13Q99616 98 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 PIMREGQ9BSJ6 248 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 CNFNQ9BYD5 112 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 ABCA4P78363 2273 aa5.8□□□□□ -1.48
TRIM49C-201ENST00000448984 PKD1L2Q7Z442 2459 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 SRRM5B3KS81 715 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 IGHV1-46P01743 117 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 IGHV3-30P01768 117 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 IGHV3-30-5P0DP03 117 aa5.79□□□□□ -1.48
TRIM49C-201ENST00000448984 CRIP1P50238 77 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms