RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 KLLNB2CW77 178 aa13.24□□□□□ -0.29
LMNA-208ENST00000448611 AMTP48728 403 aa13.24□□□□□ -0.29
LMNA-208ENST00000448611 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
LMNA-208ENST00000448611 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
LMNA-208ENST00000448611 A0A0J9YX75 114 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 CSN3P07498 182 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
LMNA-208ENST00000448611 AMN1Q8IY45 258 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 C11orf44Q8N8P7 122 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
LMNA-208ENST00000448611 CD33P20138 364 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 PMCHP20382 165 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 NIT1Q86X76 327 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
LMNA-208ENST00000448611 SNAI2O43623 268 aa13.22□□□□□ -0.29
LMNA-208ENST00000448611 OR5AL1P0C617 328 aa13.22□□□□□ -0.29
LMNA-208ENST00000448611 FHL3Q13643 280 aa13.22□□□□□ -0.29
LMNA-208ENST00000448611 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
LMNA-208ENST00000448611 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
LMNA-208ENST00000448611 U3KQK5 164 aa13.22□□□□□ -0.29
LMNA-208ENST00000448611 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
LMNA-208ENST00000448611 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
LMNA-208ENST00000448611 CITED2Q99967 270 aaPredicted RBP13.21□□□□□ -0.29
LMNA-208ENST00000448611 NAGKQ9UJ70 344 aa13.21□□□□□ -0.29
LMNA-208ENST00000448611 CRLF1O75462 422 aa13.21□□□□□ -0.3
LMNA-208ENST00000448611 HSBP1O75506 76 aa13.21□□□□□ -0.3
LMNA-208ENST00000448611 S100A12P80511 92 aa13.21□□□□□ -0.3
LMNA-208ENST00000448611 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.3
LMNA-208ENST00000448611 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.3
LMNA-208ENST00000448611 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.3
LMNA-208ENST00000448611 TRAV2A0A0B4J234 112 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 A0A1W2PRX2 142 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 D6R8Y8 96 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 NDUFA7O95182 113 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 ANXA2RQ3ZCQ2 193 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 EBLN2Q6P2I7 272 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 TMEM61Q8N0U2 210 aa13.2□□□□□ -0.3
LMNA-208ENST00000448611 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 CHCHD1Q96BP2 118 aaKnown RBP13.19□□□□□ -0.3
LMNA-208ENST00000448611 RNF114Q9Y508 228 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
LMNA-208ENST00000448611 TEP1Q99973 2627 aaKnown RBP13.19□□□□□ -0.3
LMNA-208ENST00000448611 NF1P21359 2839 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 H3BVH4 76 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 CCL24O00175 119 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 FOXI2Q6ZQN5 318 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 RNF185Q96GF1 192 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
LMNA-208ENST00000448611 LINC00614P0C842 121 aa13.18□□□□□ -0.3
LMNA-208ENST00000448611 LEPP41159 167 aa13.18□□□□□ -0.3
LMNA-208ENST00000448611 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
LMNA-208ENST00000448611 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
LMNA-208ENST00000448611 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 RAB4AP20338 218 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 CACNG7P62955 275 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 DYNLRB2Q8TF09 96 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 DUSP14O95147 198 aaKnown RBP13.17□□□□□ -0.3
LMNA-208ENST00000448611 ASIPP42127 132 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
LMNA-208ENST00000448611 M0R2Z0 102 aa13.16□□□□□ -0.3
LMNA-208ENST00000448611 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
LMNA-208ENST00000448611 C7orf71A4D174 169 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 GNRH2O43555 120 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 IGKV3-20P01619 116 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 PROK1P58294 105 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 SPANXN1Q5VSR9 72 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 EVI2AP22794 236 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 CKS2P33552 79 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 DEFB131AP59861 70 aa13.15□□□□□ -0.3
LMNA-208ENST00000448611 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
LMNA-208ENST00000448611 NIPBLQ6KC79 2804 aaeCLIP13.14□□□□□ -0.316e-7■■□□□ 14.2
LMNA-208ENST00000448611 TRAV12-3A0A0B4J271 114 aa13.14□□□□□ -0.31
LMNA-208ENST00000448611 IGHV1-24A0A0C4DH33 117 aa13.14□□□□□ -0.31
LMNA-208ENST00000448611 SMKR1H3BMG3 65 aa13.14□□□□□ -0.31
LMNA-208ENST00000448611 RNASE3P12724 160 aaKnown RBP13.14□□□□□ -0.31
LMNA-208ENST00000448611 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
LMNA-208ENST00000448611 CDKN1BP46527 198 aa13.14□□□□□ -0.31
LMNA-208ENST00000448611 KRTDAPP60985 99 aa13.14□□□□□ -0.31
LMNA-208ENST00000448611 TIMM8BQ9Y5J9 83 aaPredicted RBP13.14□□□□□ -0.31
LMNA-208ENST00000448611 PPBPP02775 128 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 Q8N976 141 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 KNCNA6PVL3 124 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 A8MTW9 85 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 NCR2O95944 276 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 NPYP01303 97 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 TSPOP30536 169 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 FAM159AQ6UWV7 190 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 SIGLEC8Q9NYZ4 499 aa13.13□□□□□ -0.31
LMNA-208ENST00000448611 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
LMNA-208ENST00000448611 HLA-DRB4P13762 266 aa13.12□□□□□ -0.31
LMNA-208ENST00000448611 SMIM15Q7Z3B0 74 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms