RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 GNRH2O43555 120 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 NUDT3O95989 172 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 HOXA5P20719 270 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 UBE2DNLQ8IWF7 75 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 TMEM75Q8N9X5 138 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 C15orf53Q8NAA6 179 aa17.54■□□□□ 0.4
HTATSF1-203ENST00000448450 PEX7O00628 323 aa17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 C1QBP02746 253 aa17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 ZNF80P51504 273 aaPredicted RBP17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 CST9LP1Q5W188 147 aa17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 AKAP14Q86UN6 197 aa17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 MBD3L1Q8WWY6 194 aa17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 NKX6-2Q9C056 277 aaPredicted RBP17.53■□□□□ 0.4
HTATSF1-203ENST00000448450 TRGV11A0A075B6L2 103 aa17.52■□□□□ 0.4
HTATSF1-203ENST00000448450 GCGP01275 180 aa17.52■□□□□ 0.4
HTATSF1-203ENST00000448450 TRAV26-1A0A087WT03 109 aa17.51■□□□□ 0.39
HTATSF1-203ENST00000448450 A0A0J9YY99 117 aa17.51■□□□□ 0.39
HTATSF1-203ENST00000448450 DNAH17Q9UFH2 4485 aa17.51■□□□□ 0.39
HTATSF1-203ENST00000448450 FBLL1A6NHQ2 334 aaKnown RBP17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 PAGE4O60829 102 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 IGHV3-53P01767 116 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 H2AFB1P0C5Y9 115 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 PPT1P50897 306 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 TDRG1Q3Y452 100 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 SMUG1Q53HV7 270 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 DPPA3Q6W0C5 159 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 HIST1H2BAQ96A08 127 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 MUC4Q99102 2169 aa17.5■□□□□ 0.39
HTATSF1-203ENST00000448450 PRSS29PA6NIE9 313 aa17.49■□□□□ 0.39
HTATSF1-203ENST00000448450 LGALS9BQ3B8N2 356 aa17.49■□□□□ 0.39
HTATSF1-203ENST00000448450 ZFP69Q49AA0 526 aa17.49■□□□□ 0.39
HTATSF1-203ENST00000448450 SAPCD1Q5SSQ6 148 aa17.49■□□□□ 0.39
HTATSF1-203ENST00000448450 ARL2-SNX15V9GYD0 113 aa17.49■□□□□ 0.39
HTATSF1-203ENST00000448450 TYMSP04818 313 aa17.48■□□□□ 0.39
HTATSF1-203ENST00000448450 SDF2L1Q9HCN8 221 aa17.48■□□□□ 0.39
HTATSF1-203ENST00000448450 C11orf21Q9P2W6 132 aa17.48■□□□□ 0.39
HTATSF1-203ENST00000448450 IGHV3-16A0A0C4DH30 117 aa17.47■□□□□ 0.39
HTATSF1-203ENST00000448450 KCNS1Q96KK3 526 aa17.47■□□□□ 0.39
HTATSF1-203ENST00000448450 C18orf15Q96N68 181 aa17.47■□□□□ 0.39
HTATSF1-203ENST00000448450 SPXQ9BT56 116 aa17.47■□□□□ 0.39
HTATSF1-203ENST00000448450 A0A1B0GVG6 124 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 M0R2N4 97 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 RTL8CO15255 209 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 PFN1P07737 140 aaKnown RBP17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 RNF212Q495C1 297 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 EIF5AL1Q6IS14 154 aaKnown RBP17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 Q86TA4 180 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 PKD1P98161 4303 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 ABCA13Q86UQ4 5058 aa17.45■□□□□ 0.38
HTATSF1-203ENST00000448450 UBE2G1P62253 170 aa17.44■□□□□ 0.38
HTATSF1-203ENST00000448450 SLC51BQ86UW2 128 aa17.44■□□□□ 0.38
HTATSF1-203ENST00000448450 NACAE9PAV3 2078 aa17.44■□□□□ 0.38
HTATSF1-203ENST00000448450 DNAH11Q96DT5 4516 aa17.43■□□□□ 0.38
HTATSF1-203ENST00000448450 DYNC1H1Q14204 4646 aaKnown RBP17.43■□□□□ 0.38
HTATSF1-203ENST00000448450 IGLV2-18A0A075B6J9 118 aa17.43■□□□□ 0.38
HTATSF1-203ENST00000448450 CCL20P78556 96 aa17.43■□□□□ 0.38
HTATSF1-203ENST00000448450 AKR1C3P42330 323 aa17.42■□□□□ 0.38
HTATSF1-203ENST00000448450 RASL10AQ92737 203 aa17.42■□□□□ 0.38
HTATSF1-203ENST00000448450 FMC1Q96HJ9 113 aa17.42■□□□□ 0.38
HTATSF1-203ENST00000448450 VSIG2Q96IQ7 327 aa17.42■□□□□ 0.38
HTATSF1-203ENST00000448450 M0R2P5 195 aa17.41■□□□□ 0.38
HTATSF1-203ENST00000448450 SFTA3P0C7M3 94 aa17.41■□□□□ 0.38
HTATSF1-203ENST00000448450 RAB5CP51148 216 aa17.41■□□□□ 0.38
HTATSF1-203ENST00000448450 C9orf62Q8N4C0 152 aa17.41■□□□□ 0.38
HTATSF1-203ENST00000448450 TCEAL7Q9BRU2 100 aa17.41■□□□□ 0.38
HTATSF1-203ENST00000448450 FABP5P3A8MUU1 101 aa17.4■□□□□ 0.38
HTATSF1-203ENST00000448450 SULT1A2P50226 295 aa17.4■□□□□ 0.38
HTATSF1-203ENST00000448450 CCL18P55774 89 aa17.4■□□□□ 0.38
HTATSF1-203ENST00000448450 ZC2HC1AQ96GY0 325 aa17.4■□□□□ 0.38
HTATSF1-203ENST00000448450 ZFP30Q9Y2G7 519 aa17.4■□□□□ 0.38
HTATSF1-203ENST00000448450 SCO2A0A1W2PP80 73 aa17.39■□□□□ 0.37
HTATSF1-203ENST00000448450 FHL2Q14192 279 aa17.39■□□□□ 0.37
HTATSF1-203ENST00000448450 ZNF479Q96JC4 524 aa17.39■□□□□ 0.37
HTATSF1-203ENST00000448450 GNG13Q9P2W3 67 aa17.39■□□□□ 0.37
HTATSF1-203ENST00000448450 TRGV4A0A0C4DH28 118 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 C9JCJ5 164 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 H3BNG1 76 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 PAX4O43316 350 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 CRIP1P50238 77 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 LINC00588Q9Y4M8 146 aa17.38■□□□□ 0.37
HTATSF1-203ENST00000448450 IGKV3D-20A0A0C4DH25 116 aa17.37■□□□□ 0.37
HTATSF1-203ENST00000448450 ORM1P02763 201 aa17.37■□□□□ 0.37
HTATSF1-203ENST00000448450 HHLA3Q9XRX5 114 aa17.37■□□□□ 0.37
HTATSF1-203ENST00000448450 TRAV1-1A0A0B4J248 108 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 TRBV6-1A0A0K0K1D8 114 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 LTAP01374 205 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 NHLRC2Q8NBF2 726 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 OR4C5Q8NGB2 326 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 PRO0255Q9UI72 69 aa17.36■□□□□ 0.37
HTATSF1-203ENST00000448450 A0A096LPF7 62 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 TEX46H3BTG2 121 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 SH2D1AO60880 128 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 CRYBA4P53673 196 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 ESRGQ1W209 222 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 MANBALQ9NQG1 85 aa17.35■□□□□ 0.37
HTATSF1-203ENST00000448450 TRAV4A0A0B4J268 109 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 M0R036 132 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 RNASE3P12724 160 aaKnown RBP17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 FAM3BP58499 235 aaPredicted RBP17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 SLAQ13239 276 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms