RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 ADIRFQ15847 76 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 NEU1Q99519 415 aa12.97□□□□□ -0.33
TRAPPC4-203ENST00000447216 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 IGKV3D-20A0A0C4DH25 116 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 GNRH2O43555 120 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 Q8NAQ8 132 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 DAZAP1Q96EP5 407 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 LINC00467Q9BRT7 94 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 RNASE7Q9H1E1 156 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 BIN3Q9NQY0 253 aa12.96□□□□□ -0.33
TRAPPC4-203ENST00000447216 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 B4DEV8 164 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 TYMSP04818 313 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 MIFP14174 115 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 NUDT10Q8NFP7 164 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 NUDT11Q96G61 164 aa12.95□□□□□ -0.34
TRAPPC4-203ENST00000447216 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
TRAPPC4-203ENST00000447216 EMP1P54849 157 aa12.94□□□□□ -0.34
TRAPPC4-203ENST00000447216 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
TRAPPC4-203ENST00000447216 ISOC2Q96AB3 205 aa12.94□□□□□ -0.34
TRAPPC4-203ENST00000447216 MUC4Q99102 2169 aa12.94□□□□□ -0.34
TRAPPC4-203ENST00000447216 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 P01737 135 aa12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 TMEM263Q8WUH6 116 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 KCNS1Q96KK3 526 aa12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
TRAPPC4-203ENST00000447216 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 IGHV3-16A0A0C4DH30 117 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 NDUFA5Q16718 116 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 OR2D3Q8NGH3 330 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 SEC11CQ9BY50 192 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
TRAPPC4-203ENST00000447216 A0A0J9YWU9 116 aa12.91□□□□□ -0.34
TRAPPC4-203ENST00000447216 GATCO43716 136 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-203ENST00000447216 GZMBP10144 247 aa12.91□□□□□ -0.34
TRAPPC4-203ENST00000447216 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
TRAPPC4-203ENST00000447216 FAM231DQ6ZW35 169 aa12.91□□□□□ -0.34
TRAPPC4-203ENST00000447216 ZNF415Q09FC8 603 aa12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 C10orf91Q5T1B1 145 aa12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 RPP21Q9H633 154 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 TIMM8BQ9Y5J9 83 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 U3KQK5 164 aa12.9□□□□□ -0.34
TRAPPC4-203ENST00000447216 ASIPP42127 132 aa12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 SFRP2Q96HF1 295 aa12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 NOP10Q9NPE3 64 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 TGP01266 2768 aa12.89□□□□□ -0.35
TRAPPC4-203ENST00000447216 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 H3BVH4 76 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 TCL1AP56279 114 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 OR10G8Q8NGN5 311 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 CARHSP1Q9Y2V2 147 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
TRAPPC4-203ENST00000447216 PNRC1Q12796 327 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-203ENST00000447216 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
TRAPPC4-203ENST00000447216 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
TRAPPC4-203ENST00000447216 V9GYV3 84 aa12.87□□□□□ -0.35
TRAPPC4-203ENST00000447216 ARMS2P0C7Q2 107 aa12.86□□□□□ -0.35
TRAPPC4-203ENST00000447216 RPS20P60866 119 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-203ENST00000447216 DNLZQ5SXM8 178 aa12.86□□□□□ -0.35
TRAPPC4-203ENST00000447216 FAM222AQ5U5X8 452 aa12.86□□□□□ -0.35
TRAPPC4-203ENST00000447216 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
TRAPPC4-203ENST00000447216 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
TRAPPC4-203ENST00000447216 CXCL1P09341 107 aa12.85□□□□□ -0.35
TRAPPC4-203ENST00000447216 RNF212Q495C1 297 aa12.85□□□□□ -0.35
TRAPPC4-203ENST00000447216 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-203ENST00000447216 DKK2Q9UBU2 259 aa12.85□□□□□ -0.35
TRAPPC4-203ENST00000447216 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 APOC3P02656 99 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 DAZ2Q13117 558 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 Q6ZTI0 123 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 SPXQ9BT56 116 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 TPPP3Q9BW30 176 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 IL36BQ9NZH7 164 aa12.84□□□□□ -0.35
TRAPPC4-203ENST00000447216 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
TRAPPC4-203ENST00000447216 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
TRAPPC4-203ENST00000447216 A8MWL6 223 aa12.83□□□□□ -0.36
TRAPPC4-203ENST00000447216 GAGE12BA1L429 117 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 CXorf65A6NEN9 183 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
TRAPPC4-203ENST00000447216 M0R2P5 195 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms