RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TMEM14BQ9NUH8 114 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 UQCRQO14949 82 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 SLC25A20O43772 301 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 SS18L1O75177 396 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 BRI3O95415 125 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 ACYP1P07311 99 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 ORM2P19652 201 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 HLA-DMBP28068 263 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 CKS2P33552 79 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 UBE2D3P61077 147 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 UBE2D2P62837 147 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRR4Q16378 134 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 RSPO1Q2MKA7 263 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 SPRNQ5BIV9 151 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMEM170BQ5T4T1 132 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM104BQ5XKR9 115 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 AMTNQ6UX39 209 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 Q6ZR03 302 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 MYOZ3Q8TDC0 251 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 PATE1Q8WXA2 126 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 FXYD5Q96DB9 178 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 TIMD4Q96H15 378 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 U3KQK5 164 aa3.21□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGLV3-12A0A075B6K2 115 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRBV7-3A0A075B6L6 115 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV8-1A0A0A6YYK1 113 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-15A0A0B4J1V0 119 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV12-1A0A0B4J245 112 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRBV7-7A0A0K0K1E9 115 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 F8VRH5 84 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 INS-IGF2F8WCM5 200 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 H3BT86 120 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 K7EMI3 77 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 MRPL33O75394 65 aaKnown RBP3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 ARMS2P0C7Q2 107 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 PYYP10082 97 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 MYCNOSP40205 109 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 LEPP41159 167 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 INSL3P51460 131 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 SSR4P51571 173 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMEM258P61165 79 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 GNG5P63218 68 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 DIAPH2-AS1Q14236 149 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 ACP7Q6ZNF0 438 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC00305Q7Z4B0 112 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 SBSPONQ8IVN8 264 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 LYPD1Q8N2G4 141 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 UBALD1Q8TB05 177 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM167A-AS1Q96KT0 104 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRADC1Q9BSG0 188 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 MRPL20Q9BYC9 149 aaKnown RBP3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 Q9H3A6 140 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMEM14CQ9P0S9 112 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 HIGD1AQ9Y241 93 aa3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3OR15-7A0A075B7D8 119 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 A0A096LNJ9 63 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 LOC100131303A0A0U1RQF7 123 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 SPTY2D1-AS1A0A0U1RR47 76 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 LOC389332A0A1B0GUA5 103 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF815PA8K554 130 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 C9JAW5 83 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 H7C1H1 209 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 ATOX1O00244 68 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 NPFFO15130 113 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 COX6CP09669 75 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 P0DMU3 169 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM231AP0DMU4 169 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM231CP0DMU5 169 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRTN3P24158 256 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 CXCL12P48061 93 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 UBE2D1P51668 147 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF138P52744 262 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 UCNP55089 124 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 GFERP55789 205 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 ATP5J2P56134 94 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 TNFAIP6P98066 277 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 PDE6HQ13956 83 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 EDDM3AQ14507 147 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 MRPL51Q4U2R6 128 aaKnown RBP3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRNTQ86SH4 94 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 C15orf53Q8NAA6 179 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM57AQ8TBR7 257 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRGV9Q99603 122 aa3.19□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV1-45A0A0A0MS14 117 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 A0A0B4J2C4 111 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV5-51A0A0C4DH38 117 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 C15orf65H3BRN8 121 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 M0R2P5 195 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms