RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 MSRB1Q9NZV6 116 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 TIMM8BQ9Y5J9 83 aaPredicted RBP7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 IGLC6P0CF74 106 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 RNASE4P34096 147 aaKnown RBP7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 Q8N2B8 174 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 OR8A1Q8NGG7 326 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 FOXC2Q99958 501 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 COX11Q9Y6N1 276 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 CREBBPQ92793 2442 aa7.19□□□□□ -1.26
COL6A4P1-201ENST00000446690 SLURP1P55000 103 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 DCANP1Q8TF63 244 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 LOC389332A0A1B0GUA5 103 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 D6R8Y8 96 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 KIR3DS1Q14943 382 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 ZNF493Q6ZR52 646 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 C11orf44Q8N8P7 122 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 DPF1Q92782 380 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 URB1-AS1Q96HZ7 61 aa7.18□□□□□ -1.26
COL6A4P1-201ENST00000446690 CD5LO43866 347 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 PSMG4Q5JS54 123 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 Q6ZSV7 163 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 TMEM86BQ8N661 226 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 RNF152Q8N8N0 203 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 ESM1Q9NQ30 184 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 CCDC168Q8NDH2 2452 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 C2orf70A6NJV1 201 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 SMKR1H3BMG3 65 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 LGALS9O00182 355 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 TSPOP30536 169 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 HINT1P49773 126 aaPredicted RBP7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 MRPL51Q4U2R6 128 aaKnown RBP7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 ZFAND2AQ8N6M9 145 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 GATD1Q8NB37 220 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 PRSS3P2Q8NHM4 247 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 MRPS16Q9Y3D3 137 aaKnown RBP7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 CUBNO60494 3623 aa7.17□□□□□ -1.26
COL6A4P1-201ENST00000446690 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 TRAV21A0A0B4J279 112 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 PPBPP02775 128 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 CKS2P33552 79 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 KLHL30-AS1Q8NEE0 82 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 LINC01619G3V211 115 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 H3BVH4 76 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 SPRY2O43597 315 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 ORMDL3Q8N138 153 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 OR10AG1Q8NH19 301 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 PRELID3AQ96N28 172 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 SMR3AQ99954 134 aa7.16□□□□□ -1.26
COL6A4P1-201ENST00000446690 IGHV1-24A0A0C4DH33 117 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 NCR2O95944 276 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 S100A4P26447 101 aaKnown RBP7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 SAMD13Q5VXD3 122 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 TMEM191AQ9H0A3 160 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 PDZD2O15018 2839 aa7.15□□□□□ -1.26
COL6A4P1-201ENST00000446690 EVI2AP22794 236 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 IFI27P40305 119 aaPredicted RBP7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 MAJINQ3KP22 176 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 FA2HQ7L5A8 372 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 OR4C5Q8NGB2 326 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 C4orf3Q8WVX3 66 aa7.15□□□□□ -1.27
COL6A4P1-201ENST00000446690 K7EQG2 157 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 GNRH2O43555 120 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 EBLN2Q6P2I7 272 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 FAM19A4Q96LR4 140 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 CNFNQ9BYD5 112 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 TLN2Q9Y4G6 2542 aa7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
COL6A4P1-201ENST00000446690 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 ADAMTSL5Q6ZMM2 481 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 SMIM15Q7Z3B0 74 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 DLX4Q92988 240 aaPredicted RBP7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 RNF185Q96GF1 192 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 AP5S1Q9NUS5 200 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 SONP18583 2426 aaKnown RBP7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 M0R381 172 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 ASIPP42127 132 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms