RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 CRYBA4P53673 196 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 RAB2AP61019 212 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 FHL2Q14192 279 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 TEX261Q6UWH6 196 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 MRPL16Q9NX20 251 aaKnown RBP7.77□□□□□ -1.17
CDCA3-203ENST00000446553 HHLA3Q9XRX5 114 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 FBLL1A6NHQ2 334 aaKnown RBP7.76□□□□□ -1.17
CDCA3-203ENST00000446553 K7EP13 123 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 MRPL23Q16540 153 aaKnown RBP7.76□□□□□ -1.17
CDCA3-203ENST00000446553 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 C5orf17Q8NAS9 161 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 KCNS1Q96KK3 526 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 KRTAP1-5Q9BYS1 174 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 MDFICQ9P1T7 246 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 ABCA13Q86UQ4 5058 aa7.76□□□□□ -1.17
CDCA3-203ENST00000446553 ORM1P02763 201 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 ARL14EPLP0DKL9 152 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 ATP6V0CP27449 155 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 TMEM183BQ1AE95 376 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 MUC21Q5SSG8 566 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 NEGR1Q7Z3B1 354 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 TMEM183AQ8IXX5 376 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 HSD17B11Q8NBQ5 300 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 RAB24Q969Q5 203 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 TREM1Q9NP99 234 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 TMEM167BQ9NRX6 74 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 HSPG2P98160 4391 aa7.75□□□□□ -1.17
CDCA3-203ENST00000446553 TRAV4A0A0B4J268 109 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 UMAD1C9J7I0 102 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 K7EQM0 130 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 M0R2P5 195 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 SIVA1O15304 175 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 CIDEAO60543 219 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 CXorf1O96002 111 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 GCHFRP30047 84 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 RAB5CP51148 216 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 IFITM2Q01629 132 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 ZNF575Q86XF7 245 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 NDFIP1Q9BT67 221 aa7.74□□□□□ -1.17
CDCA3-203ENST00000446553 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 A0A1W2PRE2 83 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 EIF3GO75821 320 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDCA3-203ENST00000446553 CDK2AP2O75956 126 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 TCRAP04437 139 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 LYPD5Q6UWN5 251 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 ACTR3CQ9C0K3 210 aaPredicted RBP7.73□□□□□ -1.17
CDCA3-203ENST00000446553 SDF2L1Q9HCN8 221 aa7.73□□□□□ -1.17
CDCA3-203ENST00000446553 TRAV8-1A0A0A6YYK1 113 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 C16orf90A8MZG2 172 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 C9JCJ5 164 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 HMGB3O15347 200 aaKnown RBP7.72□□□□□ -1.17
CDCA3-203ENST00000446553 NXPH4O95158 308 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 TIRAPP58753 221 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 AKR1C8PQ5T2L2 129 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 ALKAL2Q6UX46 152 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 PTH2Q96A98 100 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 TXNDC17Q9BRA2 123 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 EPDR1Q9UM22 224 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 RPH3ALQ9UNE2 315 aa7.72□□□□□ -1.17
CDCA3-203ENST00000446553 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
CDCA3-203ENST00000446553 GGTLC3B5MD39 225 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 K7EQD1 137 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 GNRH2O43555 120 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 TYMSP04818 313 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 PFN1P07737 140 aaKnown RBP7.71□□□□□ -1.18
CDCA3-203ENST00000446553 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 SRIP30626 198 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 LINC00315P59091 139 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 RAB14P61106 215 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 GNG5P63218 68 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 SAPCD1Q5SSQ6 148 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 Q6ZRN7 208 aaPredicted RBP7.71□□□□□ -1.18
CDCA3-203ENST00000446553 NFE4Q86UQ8 179 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 CYB561D1Q8N8Q1 229 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 OR4C5Q8NGB2 326 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 PCNPQ8WW12 178 aaKnown RBP7.71□□□□□ -1.18
CDCA3-203ENST00000446553 NKX6-2Q9C056 277 aaPredicted RBP7.71□□□□□ -1.18
CDCA3-203ENST00000446553 NAGKQ9UJ70 344 aa7.71□□□□□ -1.18
CDCA3-203ENST00000446553 TRAV9-2A0A087WT02 112 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 CTXND1A0A1B0GTU2 59 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 F6UZH7 168 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 GYPEP15421 78 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 SULT1A2P50226 295 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
CDCA3-203ENST00000446553 FLI1Q01543 452 aaPredicted RBP7.7□□□□□ -1.18
CDCA3-203ENST00000446553 SMUG1Q53HV7 270 aa7.7□□□□□ -1.18
CDCA3-203ENST00000446553 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms