RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NKX2-5P52952 324 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 Q6ZTI0 123 aa12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
SMARCAL1-209ENST00000444508 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
SMARCAL1-209ENST00000444508 LGALS9CQ6DKI2 356 aa12.33□□□□□ -0.44
SMARCAL1-209ENST00000444508 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.44
SMARCAL1-209ENST00000444508 GNG13Q9P2W3 67 aa12.33□□□□□ -0.44
SMARCAL1-209ENST00000444508 SPINK4O60575 86 aa12.32□□□□□ -0.44
SMARCAL1-209ENST00000444508 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-209ENST00000444508 CCL20P78556 96 aa12.32□□□□□ -0.44
SMARCAL1-209ENST00000444508 TMEM88Q6PEY1 159 aa12.32□□□□□ -0.44
SMARCAL1-209ENST00000444508 ZFP30Q9Y2G7 519 aa12.32□□□□□ -0.44
SMARCAL1-209ENST00000444508 IFNA1P01562 189 aa12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 LGALS9BQ3B8N2 356 aa12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 SPXQ9BT56 116 aa12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 HYDINQ4G0P3 5121 aa12.31□□□□□ -0.44
SMARCAL1-209ENST00000444508 TRBV6-1A0A0K0K1D8 114 aa12.3□□□□□ -0.44
SMARCAL1-209ENST00000444508 GNRH2O43555 120 aa12.3□□□□□ -0.44
SMARCAL1-209ENST00000444508 TYMSP04818 313 aa12.3□□□□□ -0.44
SMARCAL1-209ENST00000444508 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
SMARCAL1-209ENST00000444508 MRPL16Q9NX20 251 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-209ENST00000444508 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 OR5I1Q13606 314 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 C15orf53Q8NAA6 179 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 TXNDC17Q9BRA2 123 aa12.29□□□□□ -0.44
SMARCAL1-209ENST00000444508 LTAP01374 205 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 BLOC1S1P78537 153 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 C11orf21Q9P2W6 132 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
SMARCAL1-209ENST00000444508 P0DMU3 169 aa12.27□□□□□ -0.45
SMARCAL1-209ENST00000444508 FAM231AP0DMU4 169 aa12.27□□□□□ -0.45
SMARCAL1-209ENST00000444508 FAM231CP0DMU5 169 aa12.27□□□□□ -0.45
SMARCAL1-209ENST00000444508 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
SMARCAL1-209ENST00000444508 M0R2P5 195 aa12.26□□□□□ -0.45
SMARCAL1-209ENST00000444508 HOXA5P20719 270 aa12.26□□□□□ -0.45
SMARCAL1-209ENST00000444508 MEF2BQ02080 365 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-209ENST00000444508 FAM162BQ5T6X4 162 aa12.26□□□□□ -0.45
SMARCAL1-209ENST00000444508 TRAV26-1A0A087WT03 109 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 NUDT3O95989 172 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 ORM1P02763 201 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 BCL2P10415 239 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 RASL10AQ92737 203 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
SMARCAL1-209ENST00000444508 B4DEV8 164 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 PDE6DO43924 150 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 SH2D1AO60880 128 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 IGHV3-53P01767 116 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 RPL35P42766 123 aaKnown RBP12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 UBE2DNLQ8IWF7 75 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 VAX2Q9UIW0 290 aa12.24□□□□□ -0.45
SMARCAL1-209ENST00000444508 A0A0J9YY99 117 aa12.23□□□□□ -0.45
SMARCAL1-209ENST00000444508 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-209ENST00000444508 CRIP1P50238 77 aa12.23□□□□□ -0.45
SMARCAL1-209ENST00000444508 ZNF674Q2M3X9 581 aa12.23□□□□□ -0.45
SMARCAL1-209ENST00000444508 MUC4Q99102 2169 aa12.23□□□□□ -0.45
SMARCAL1-209ENST00000444508 IGKV3D-20A0A0C4DH25 116 aa12.22□□□□□ -0.45
SMARCAL1-209ENST00000444508 M0R036 132 aa12.22□□□□□ -0.45
SMARCAL1-209ENST00000444508 ASIPP42127 132 aa12.22□□□□□ -0.45
SMARCAL1-209ENST00000444508 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
SMARCAL1-209ENST00000444508 C9JCJ5 164 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 H3BNG1 76 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 SLAQ13239 276 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 C9orf85Q96MD7 179 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 MED9Q9NWA0 146 aa12.21□□□□□ -0.45
SMARCAL1-209ENST00000444508 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 KRBOX1C9JBD0 128 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 RNF212Q495C1 297 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 OR4C5Q8NGB2 326 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
SMARCAL1-209ENST00000444508 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 RNASE3P12724 160 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 CENPWQ5EE01 88 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 PRR27Q6MZM9 219 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
SMARCAL1-209ENST00000444508 TMSB15BA0A087X1C1 80 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 PAX4O43316 350 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 GNG4P50150 75 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 FHL2Q14192 279 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 LYPD6BQ8NI32 183 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 PTH2Q96A98 100 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 IL36BQ9NZH7 164 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms