RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 GAGE12IP0CL82 117 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TMEM88Q6PEY1 159 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 MBD3L1Q8WWY6 194 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SGK494Q96LW2 274 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SDF2L1Q9HCN8 221 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 MANBALQ9NQG1 85 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 RYR2Q92736 4967 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 A0A1B0GV50 99 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 IFNA1P01562 189 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 PFN1P07737 140 aaKnown RBP7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 AKR1C3P42330 323 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TMEM183BQ1AE95 376 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 LGALS9BQ3B8N2 356 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TDRG1Q3Y452 100 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 Q86TA4 180 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 LINC00612Q8N6U2 182 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SPXQ9BT56 116 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 KLF12Q9Y4X4 402 aa7.32□□□□□ -1.24
HLA-DQB1-206ENST00000443574 PAGE4O60829 102 aa7.31□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SULT1A2P50226 295 aa7.31□□□□□ -1.24
HLA-DQB1-206ENST00000443574 Q6ZTI0 123 aa7.31□□□□□ -1.24
HLA-DQB1-206ENST00000443574 C18orf15Q96N68 181 aa7.31□□□□□ -1.24
HLA-DQB1-206ENST00000443574 MUC4Q99102 2169 aa7.31□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SPINK4O60575 86 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 IGLV2-11P01706 119 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 S100A9P06702 114 aaKnown RBP7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 OR5I1Q13606 314 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 C9orf62Q8N4C0 152 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TXNDC17Q9BRA2 123 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TP53TG3Q9ULZ0 132 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 ZFP30Q9Y2G7 519 aa7.3□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TRAV34A0A0B4J273 112 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 NUDT3O95989 172 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TYMSP04818 313 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 MRPL16Q9NX20 251 aaKnown RBP7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GNG13Q9P2W3 67 aa7.29□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TRBV6-1A0A0K0K1D8 114 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 FABP5P3A8MUU1 101 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 H3BNG1 76 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 EREGO14944 169 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TAGLN2P37802 199 aaKnown RBP7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 SLAQ13239 276 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 RNF212Q495C1 297 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 Q6ZQT7 251 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 POM121L12Q8N7R1 296 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 LINC00479Q96M42 142 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 MDFICQ9P1T7 246 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 NACAE9PAV3 2078 aa7.28□□□□□ -1.24
HLA-DQB1-206ENST00000443574 VPS13DQ5THJ4 4388 aa7.27□□□□□ -1.24
HLA-DQB1-206ENST00000443574 IGHV3-16A0A0C4DH30 117 aa7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 M0R2P5 195 aa7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 S100A4P26447 101 aaKnown RBP7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ZNF80P51504 273 aaPredicted RBP7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 CCL18P55774 89 aa7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 FAM3BP58499 235 aaPredicted RBP7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 FAM162BQ5T6X4 162 aa7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
HLA-DQB1-206ENST00000443574 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 TRGV4A0A0C4DH28 118 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PDE6DO43924 150 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 LTAP01374 205 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ORM1P02763 201 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 HOXA5P20719 270 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ASIPP42127 132 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 BLOC1S1P78537 153 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 MEF2BQ02080 365 aaPredicted RBP7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PCNPQ8WW12 178 aaKnown RBP7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 RASL10AQ92737 203 aa7.26□□□□□ -1.25
HLA-DQB1-206ENST00000443574 TRAV4A0A0B4J268 109 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 A0A0J9YY99 117 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 A0A1B0GVG6 124 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 B4DEV8 164 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 GNRH2O43555 120 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 IGHV3-53P01767 116 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 BCL2P10415 239 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ALKAL2Q6UX46 152 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 COX8CQ7Z4L0 72 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 OR4C5Q8NGB2 326 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ZC2HC1AQ96GY0 325 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
HLA-DQB1-206ENST00000443574 C9JCJ5 164 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PAX4O43316 350 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 CIDEAO60543 219 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 SH2D1AO60880 128 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 BAGE2Q86Y30 109 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 SYT8Q8NBV8 401 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 C11orf52Q96A22 123 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 VAX2Q9UIW0 290 aa7.24□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms