RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 C3orf56Q8N813 242 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 ZNF418Q8TF45 676 aaPredicted RBP0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 DGCR14Q96DF8 476 aaKnown RBP0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 C9orf16Q9BUW7 83 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 IMUPQ9GZP8 106 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 BCL2L10Q9HD36 194 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 C14orf132Q9NPU4 83 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 OPTCQ9UBM4 332 aa0.84□□□□□ -2.27
NEFMP1-201ENST00000443423 PLXNA4Q9HCM2 1894 aa0.84□□□□□ -2.28
NEFMP1-201ENST00000443423 POLEQ07864 2286 aa0.84□□□□□ -2.28
NEFMP1-201ENST00000443423 MED23Q9ULK4 1368 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 PARP14Q460N5 1801 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 TRGV10A0A0A0MS01 117 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 TRBV6-8A0A0A6YYG3 113 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 M0R2N4 97 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ATP5G3P48201 142 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 HSPE1P61604 102 aaKnown RBP0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ARF6P62330 175 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 CNBPP62633 177 aaKnown RBP0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 DYNLT1P63172 113 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 KRR1Q13601 381 aaKnown RBP0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 DEFB113Q30KQ7 82 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 C1orf137Q5JT78 98 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 LINC00301Q8NCQ3 95 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 SLAMF6Q96DU3 332 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 LINC00526Q96FQ7 95 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 YPEL2Q96QA6 119 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 PRADC1Q9BSG0 188 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 C6orf62Q9GZU0 229 aaPredicted RBP0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ACER3Q9NUN7 267 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ARMC1Q9NVT9 282 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 RASL12Q9NYN1 266 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ARL5AQ9Y689 179 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 DLG5Q8TDM6 1919 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 STAB2Q8WWQ8 2551 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 MUC4Q99102 2169 aa0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 ZFC3H1O60293 1989 aaKnown RBP0.83□□□□□ -2.28
NEFMP1-201ENST00000443423 HELZP42694 1942 aaKnown RBP0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 DMBT1Q9UGM3 2413 aaPredicted RBP0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 TRBV6-7A0A0A0MS04 114 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 IFNA7P01567 189 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 C1QBP02746 253 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 FKBP1CQ5VVH2 108 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 C22orf39Q6P5X5 142 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 Q8N814 137 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 SLC30A7Q8NEW0 376 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 STAG3L4Q8TBR4 150 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 PHB2Q99623 299 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 LINC00467Q9BRT7 94 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 TMEM126AQ9H061 195 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 C22orf24Q9Y442 160 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 EXPH5Q8NEV8 1989 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 CHD3Q12873 2000 aaKnown RBP0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 TNRC6BQ9UPQ9 1833 aaKnown RBP0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 PKHD1P08F94 4074 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 DOCK1Q14185 1865 aa0.82□□□□□ -2.28
NEFMP1-201ENST00000443423 MYLKQ15746 1914 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 INE1O15225 51 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 HMGB3O15347 200 aaKnown RBP0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 BCL2L15Q5TBC7 163 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 S100A7AQ86SG5 101 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 PXT1Q8NFP0 134 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 ZFP30Q9Y2G7 519 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 DENND4CQ5VZ89 1909 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 CACNA1CQ13936 2221 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 ROS1P08922 2347 aa0.81□□□□□ -2.28
NEFMP1-201ENST00000443423 SIPA1L3O60292 1781 aaPredicted RBP0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 HSPG2P98160 4391 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 LAMA4Q16363 1823 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 ABCA1O95477 2261 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 NEBP20929 6669 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 A8MWV9 139 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 ZNF736B4DX44 427 aaPredicted RBP0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 TAX1BP3O14907 124 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 TIMM17BO60830 172 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 GGCTO75223 188 aaKnown RBP0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 GADD45GO95257 159 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 DHFRP00374 187 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 TAF1AQ15573 450 aaPredicted RBP0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 DHRS4L2Q6PKH6 230 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 PDZD9Q8IXQ8 264 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 Q8IYB0 196 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 PYCARDQ9ULZ3 195 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 SSPOA2VEC9 5147 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 STARD9Q9P2P6 4700 aa0.8□□□□□ -2.28
NEFMP1-201ENST00000443423 MYH13Q9UKX3 1938 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 MCM3APO60318 1980 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 MYCBP2O75592 4640 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 HUWE1Q7Z6Z7 4374 aaKnown RBP0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 DNAH9Q9NYC9 4486 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 DNAH7Q8WXX0 4024 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 CCDC160A6NGH7 325 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 M0R378 163 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 NDUFB3O43676 98 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 UBE2BP63146 152 aa0.79□□□□□ -2.28
NEFMP1-201ENST00000443423 GDF5OSQ5U4N7 250 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms