RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 NKX2-5P52952 324 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 CCL20P78556 96 aa10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 Q6ZTI0 123 aa10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 NAGKQ9UJ70 344 aa10.61□□□□□ -0.71
CSNK1E-210ENST00000442216 FABP5P3A8MUU1 101 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 LTAP01374 205 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 IFNA1P01562 189 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 BLOC1S1P78537 153 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 C15orf53Q8NAA6 179 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 MUC4Q99102 2169 aa10.6□□□□□ -0.71
CSNK1E-210ENST00000442216 TRGV1A0A0A0MS02 117 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 F5H768 121 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 LY6G6CO95867 125 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 TYMSP04818 313 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 TAGLN2P37802 199 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 ALKAL2Q6UX46 152 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
CSNK1E-210ENST00000442216 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 GNRH2O43555 120 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 TMEM88Q6PEY1 159 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 RASL10AQ92737 203 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 DYNC2H1Q8NCM8 4307 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-210ENST00000442216 P0DMU3 169 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 LYPD6BQ8NI32 183 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 ZC2HC1AQ96GY0 325 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 C11orf21Q9P2W6 132 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
CSNK1E-210ENST00000442216 M0R2P5 195 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 PDE6DO43924 150 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 BCL2P10415 239 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 ZNF674Q2M3X9 581 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 FAM162BQ5T6X4 162 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
CSNK1E-210ENST00000442216 H3BNG1 76 aa10.55□□□□□ -0.72
CSNK1E-210ENST00000442216 CRIP1P50238 77 aa10.55□□□□□ -0.72
CSNK1E-210ENST00000442216 MLST8Q9BVC4 326 aa10.55□□□□□ -0.72
CSNK1E-210ENST00000442216 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 HOXA5P20719 270 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 OR5I1Q13606 314 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 PTH2Q96A98 100 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 LYSTQ99698 3801 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 NACAE9PAV3 2078 aa10.54□□□□□ -0.72
CSNK1E-210ENST00000442216 SH2D1AO60880 128 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 ORM1P02763 201 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 RPL35P42766 123 aaKnown RBP10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 SLAQ13239 276 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 RNF212Q495C1 297 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 SMIM12Q96EX1 92 aa10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 PLECQ15149 4684 aaKnown RBP10.53□□□□□ -0.72
CSNK1E-210ENST00000442216 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
CSNK1E-210ENST00000442216 B4DEV8 164 aa10.52□□□□□ -0.73
CSNK1E-210ENST00000442216 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
CSNK1E-210ENST00000442216 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
CSNK1E-210ENST00000442216 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
CSNK1E-210ENST00000442216 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 CIDEAO60543 219 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 ASIPP42127 132 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 IL36BQ9NZH7 164 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
CSNK1E-210ENST00000442216 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 NUDT3O95989 172 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 PRO0255Q9UI72 69 aa10.5□□□□□ -0.73
CSNK1E-210ENST00000442216 CXCL1P09341 107 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 FHL2Q14192 279 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 ZNF506Q5JVG8 444 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 TEX261Q6UWH6 196 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 UBE2DNLQ8IWF7 75 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 VSIG2Q96IQ7 327 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
CSNK1E-210ENST00000442216 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
CSNK1E-210ENST00000442216 A0A0J9YY99 117 aa10.48□□□□□ -0.73
CSNK1E-210ENST00000442216 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
CSNK1E-210ENST00000442216 M0R036 132 aa10.48□□□□□ -0.73
CSNK1E-210ENST00000442216 IGHV3-53P01767 116 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms