RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 IGHV4-30-4P0DP06 118 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
PTPRR-204ENST00000440835 TCL1AP56279 114 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 VWC2Q2TAL6 325 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 C4orf48Q5BLP8 95 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 OR13C6PQ8NH95 151 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM126AQ9H061 195 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 DNAH1Q9P2D7 4330 aa4.58□□□□□ -1.68
PTPRR-204ENST00000440835 FAM223BA6NKX1 122 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 MT-ND6P03923 174 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 CT45A6P0DMU7 189 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 CT45A5P0DMU8 189 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 CT45A7P0DMV0 189 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 CRYBB3P26998 211 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 SLURP1P55000 103 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 HIST1H1AQ02539 215 aaPredicted RBP4.57□□□□□ -1.68
PTPRR-204ENST00000440835 ECSCRQ19T08 205 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 MRPL54Q6P161 138 aaKnown RBP4.57□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM14EPQ6UXP3 125 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 FAM223AQ8IWN6 122 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 ARPC1AQ92747 370 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 NPCDR1Q9BY65 106 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 ZNF257Q9Y2Q1 563 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 GAGE12HA6NDE8 117 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 TRGV3P03979 118 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 GPR183P32249 361 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 HSPE1P61604 102 aaKnown RBP4.57□□□□□ -1.68
PTPRR-204ENST00000440835 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM97Q5BJF2 176 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 URB1-AS1Q96HZ7 61 aa4.57□□□□□ -1.68
PTPRR-204ENST00000440835 PMS2P5A8MQ11 134 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 UPK2O00526 184 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 PROP1O75360 226 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 APCSP02743 223 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 FXYD3Q14802 87 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 CD300EQ496F6 205 aaPredicted RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 OR1L8Q8NGR8 309 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 BLNKQ8WV28 456 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM147Q9BVK8 224 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 RNASE7Q9H1E1 156 aaKnown RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 FBXL15Q9H469 300 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 PLEKHA3Q9HB20 300 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 YTHDF2Q9Y5A9 579 aaKnown RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 J3QR89 54 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 CRXO43186 299 aaPredicted RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 ARL14EPLP0DKL9 152 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 SUB1P53999 127 aaKnown RBP eCLIP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 ERHP84090 104 aaKnown RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 NDPQ00604 133 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 GDF5OSQ5U4N7 250 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 SPATA31B1PQ5VZV4 182 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 LINC00322Q6ZN03 302 aaPredicted RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 TEX45Q8NA69 505 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 OR10AG1Q8NH19 301 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 DNAJC30Q96LL9 226 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
PTPRR-204ENST00000440835 HUWE1Q7Z6Z7 4374 aaKnown RBP4.56□□□□□ -1.68
PTPRR-204ENST00000440835 H3BRM9 83 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 HLA-DQA1P01909 254 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 CNTFRP26992 372 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 RPL8P62917 257 aaKnown RBP4.55□□□□□ -1.68
PTPRR-204ENST00000440835 APRG1Q8IVJ8 170 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM167AQ8TBQ9 72 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 RITA1Q96K30 269 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM189A5PLL7 270 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.55□□□□□ -1.68
PTPRR-204ENST00000440835 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 LGALS9O00182 355 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 SEC11AP67812 179 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 KLK9Q2XQG4 91 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 TMEM14BQ9NUH8 114 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 KLK9Q9UKQ9 250 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
PTPRR-204ENST00000440835 A0A087WX48 190 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 A0A1W2PRE2 83 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 MPDU1O75352 247 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 CA1P00915 261 aaPredicted RBP4.54□□□□□ -1.68
PTPRR-204ENST00000440835 CSN3P07498 182 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 SAA1P0DJI8 122 aaPredicted RBP4.54□□□□□ -1.68
PTPRR-204ENST00000440835 EDN2P20800 178 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 GNG4P50150 75 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 PRCDQ00LT1 54 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 KIR3DS1Q14943 382 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 RAB37Q96AX2 223 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 KRTAP3-2Q9BYR7 98 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 A0A1W2PPM0 123 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 C9JCJ5 164 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 LINC00205P59089 165 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 SMIM27A0A1W2PRY6 76 aa4.54□□□□□ -1.68
PTPRR-204ENST00000440835 CGB1A6NKQ9 187 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms