RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TRAV4A0A0B4J268 109 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 CXorf1O96002 111 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 GCHFRP30047 84 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 GNG5P63218 68 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 PKHD1P08F94 4074 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
CCDC78-204ENST00000439619 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
CCDC78-204ENST00000439619 GNRH2O43555 120 aa12.91□□□□□ -0.34
CCDC78-204ENST00000439619 TCRAP04437 139 aa12.91□□□□□ -0.34
CCDC78-204ENST00000439619 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
CCDC78-204ENST00000439619 K7EP13 123 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 K7EQD1 137 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 TAAR5O14804 337 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 EREGO14944 169 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 GYPEP15421 78 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 LINC00315P59091 139 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 SH2D6Q7Z4S9 175 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 NFE4Q86UQ8 179 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 LY96Q9Y6Y9 160 aa12.9□□□□□ -0.34
CCDC78-204ENST00000439619 CDK2AP2O75956 126 aa12.89□□□□□ -0.35
CCDC78-204ENST00000439619 TYMSP04818 313 aa12.89□□□□□ -0.35
CCDC78-204ENST00000439619 SUMO1P63165 101 aaKnown RBP12.89□□□□□ -0.35
CCDC78-204ENST00000439619 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
CCDC78-204ENST00000439619 TVP23CQ96ET8 276 aa12.89□□□□□ -0.35
CCDC78-204ENST00000439619 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 EVI2AP22794 236 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 CYB561D1Q8N8Q1 229 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 SGK494Q96LW2 274 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
CCDC78-204ENST00000439619 CIDEAO60543 219 aa12.87□□□□□ -0.35
CCDC78-204ENST00000439619 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-204ENST00000439619 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
CCDC78-204ENST00000439619 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
CCDC78-204ENST00000439619 GCGP01275 180 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 PFN1P07737 140 aaKnown RBP12.86□□□□□ -0.35
CCDC78-204ENST00000439619 PPT1P50897 306 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 ERVFC1-1P60608 527 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 ZNF876PQ49A33 203 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 TMEM75Q8N9X5 138 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 DNAH11Q96DT5 4516 aa12.86□□□□□ -0.35
CCDC78-204ENST00000439619 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
CCDC78-204ENST00000439619 Q5BKY6 102 aa12.85□□□□□ -0.35
CCDC78-204ENST00000439619 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
CCDC78-204ENST00000439619 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
CCDC78-204ENST00000439619 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
CCDC78-204ENST00000439619 IFNA7P01567 189 aa12.84□□□□□ -0.35
CCDC78-204ENST00000439619 AKR1C8PQ5T2L2 129 aa12.84□□□□□ -0.35
CCDC78-204ENST00000439619 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
CCDC78-204ENST00000439619 NKX6-2Q9C056 277 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-204ENST00000439619 MUC4Q99102 2169 aa12.84□□□□□ -0.35
CCDC78-204ENST00000439619 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
CCDC78-204ENST00000439619 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
CCDC78-204ENST00000439619 RGS21Q2M5E4 152 aa12.83□□□□□ -0.36
CCDC78-204ENST00000439619 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
CCDC78-204ENST00000439619 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-204ENST00000439619 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
CCDC78-204ENST00000439619 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
CCDC78-204ENST00000439619 IGLV2-11P01706 119 aa12.81□□□□□ -0.36
CCDC78-204ENST00000439619 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
CCDC78-204ENST00000439619 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
CCDC78-204ENST00000439619 ZNF80P51504 273 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-204ENST00000439619 RHOHQ15669 191 aa12.81□□□□□ -0.36
CCDC78-204ENST00000439619 Q6ZRN7 208 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-204ENST00000439619 WFDC10BQ8IUB3 73 aa12.81□□□□□ -0.36
CCDC78-204ENST00000439619 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
CCDC78-204ENST00000439619 TRAV8-6A0A0B4J262 113 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 TIRAPP58753 221 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 KRTAP10-2P60368 255 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 CFAP126Q5VTH2 177 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 HIST1H2BAQ96A08 127 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 PTH2Q96A98 100 aa12.8□□□□□ -0.36
CCDC78-204ENST00000439619 DYNC1H1Q14204 4646 aaKnown RBP12.8□□□□□ -0.36
CCDC78-204ENST00000439619 FABP5P3A8MUU1 101 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 RS1O15537 224 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 CRYGDP07320 174 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 MGST1P10620 155 aaKnown RBP12.79□□□□□ -0.36
CCDC78-204ENST00000439619 UBE2G2P60604 165 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 STOML3Q8TAV4 291 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
CCDC78-204ENST00000439619 LOC100131303A0A0U1RQF7 123 aa12.78□□□□□ -0.36
CCDC78-204ENST00000439619 PEX7O00628 323 aa12.78□□□□□ -0.36
CCDC78-204ENST00000439619 ARPC5O15511 151 aa12.78□□□□□ -0.36
CCDC78-204ENST00000439619 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
CCDC78-204ENST00000439619 TRAV34A0A0B4J273 112 aa12.77□□□□□ -0.37
CCDC78-204ENST00000439619 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
CCDC78-204ENST00000439619 ASIPP42127 132 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms