RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR5I1Q13606 314 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 SBSPONQ8IVN8 264 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 SVBPQ8N300 66 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 SFRP2Q96HF1 295 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 TP53TG3Q9ULZ0 132 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 CMYA5Q8N3K9 4069 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 GATCO43716 136 aaKnown RBP9.19□□□□□ -0.94
SCLT1-202ENST00000439369 MT-ND4LP03901 98 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 MIFP14174 115 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 RHEBQ15382 184 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
SCLT1-202ENST00000439369 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
SCLT1-202ENST00000439369 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 SNAPINO95295 136 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
SCLT1-202ENST00000439369 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 OR10G8Q8NGN5 311 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 TMEM263Q8WUH6 116 aaKnown RBP9.18□□□□□ -0.94
SCLT1-202ENST00000439369 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 OVOL2Q9BRP0 275 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 RNASE7Q9H1E1 156 aaKnown RBP9.18□□□□□ -0.94
SCLT1-202ENST00000439369 NAGKQ9UJ70 344 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 X6R8D5 127 aa9.18□□□□□ -0.94
SCLT1-202ENST00000439369 IGHV3OR16-12A0A075B7B8 117 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 A0A087WWC5 75 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 FAM231BA6NCW3 169 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 CBY3A6NI87 242 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 A8MWL6 223 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 M0R036 132 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 APOC3P02656 99 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 ASIPP42127 132 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 Q6ZQT7 251 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 CLRN3Q8NCR9 226 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 OR11H2Q8NH07 326 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 CTDSP1Q9GZU7 261 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 ZMAT4Q9H898 229 aa9.17□□□□□ -0.94
SCLT1-202ENST00000439369 A0A1W2PPQ1 181 aa9.16□□□□□ -0.94
SCLT1-202ENST00000439369 ZNF705GA8MUZ8 300 aaPredicted RBP9.16□□□□□ -0.94
SCLT1-202ENST00000439369 TYMSP04818 313 aa9.16□□□□□ -0.94
SCLT1-202ENST00000439369 RNASE8Q8TDE3 154 aaKnown RBP9.16□□□□□ -0.94
SCLT1-202ENST00000439369 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
SCLT1-202ENST00000439369 V9GYV3 84 aa9.16□□□□□ -0.94
SCLT1-202ENST00000439369 IGHV3-16A0A0C4DH30 117 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 TCL1AP56279 114 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 RNF212Q495C1 297 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 ZNF575Q86XF7 245 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 Q8NAQ8 132 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 PTH2Q96A98 100 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 SPXQ9BT56 116 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
SCLT1-202ENST00000439369 IL36BQ9NZH7 164 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 DNAH3Q8TD57 4116 aa9.15□□□□□ -0.94
SCLT1-202ENST00000439369 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 F2Z2F3 143 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 GNRH2O43555 120 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 OR5AL1P0C617 328 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 IGLC6P0CF74 106 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 HTN1P15515 57 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 S100A1P23297 94 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
SCLT1-202ENST00000439369 FOXA3P55318 350 aaPredicted RBP9.14□□□□□ -0.95
SCLT1-202ENST00000439369 RPL19P84098 196 aaKnown RBP9.14□□□□□ -0.95
SCLT1-202ENST00000439369 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
SCLT1-202ENST00000439369 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 C11orf72Q8NBR9 251 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 IL17DQ8TAD2 202 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
SCLT1-202ENST00000439369 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
SCLT1-202ENST00000439369 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 IGHV4-28A0A0C4DH34 117 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 SNURFLB1AK76 121 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 SNAI2O43623 268 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
SCLT1-202ENST00000439369 AZU1P20160 251 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
SCLT1-202ENST00000439369 TIMM8BQ9Y5J9 83 aaPredicted RBP9.13□□□□□ -0.95
SCLT1-202ENST00000439369 SMIM27A0A1W2PRY6 76 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 GRIFINA4D1Z8 144 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 CTRLP40313 264 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms