RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SPCS1Q9Y6A9 102 aa11.73□□□□□ -0.53
APP-208ENST00000439274 PKD1L2Q7Z442 2459 aa11.72□□□□□ -0.53
APP-208ENST00000439274 ATP5LO75964 103 aa11.72□□□□□ -0.53
APP-208ENST00000439274 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
APP-208ENST00000439274 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.53
APP-208ENST00000439274 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
APP-208ENST00000439274 MYOZ3Q8TDC0 251 aa11.71□□□□□ -0.53
APP-208ENST00000439274 MRPL53Q96EL3 112 aaKnown RBP11.71□□□□□ -0.53
APP-208ENST00000439274 SMIM13P0DJ93 91 aa11.71□□□□□ -0.53
APP-208ENST00000439274 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
APP-208ENST00000439274 GLMPQ8WWB7 406 aa11.7□□□□□ -0.54
APP-208ENST00000439274 KLK15Q9H2R5 256 aa11.7□□□□□ -0.54
APP-208ENST00000439274 HIGD1BQ9P298 99 aa11.7□□□□□ -0.54
APP-208ENST00000439274 M0R381 172 aa11.7□□□□□ -0.54
APP-208ENST00000439274 SAMD5Q5TGI4 173 aa11.7□□□□□ -0.54
APP-208ENST00000439274 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
APP-208ENST00000439274 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
APP-208ENST00000439274 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
APP-208ENST00000439274 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
APP-208ENST00000439274 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
APP-208ENST00000439274 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
APP-208ENST00000439274 ARL3P36405 182 aa11.69□□□□□ -0.54
APP-208ENST00000439274 COTL1Q14019 142 aa11.69□□□□□ -0.54
APP-208ENST00000439274 ABCA2Q9BZC7 2435 aa11.69□□□□□ -0.54
APP-208ENST00000439274 SPTAN1Q13813 2472 aaKnown RBP11.69□□□□□ -0.54
APP-208ENST00000439274 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
APP-208ENST00000439274 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
APP-208ENST00000439274 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
APP-208ENST00000439274 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
APP-208ENST00000439274 A0A087WX48 190 aa11.68□□□□□ -0.54
APP-208ENST00000439274 FABP2P12104 132 aa11.68□□□□□ -0.54
APP-208ENST00000439274 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
APP-208ENST00000439274 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
APP-208ENST00000439274 RPL39LQ96EH5 51 aaKnown RBP11.67□□□□□ -0.54
APP-208ENST00000439274 COL12A1Q99715 3063 aa11.67□□□□□ -0.54
APP-208ENST00000439274 SMIM2Q9BVW6 85 aa11.67□□□□□ -0.54
APP-208ENST00000439274 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
APP-208ENST00000439274 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
APP-208ENST00000439274 F6UB75 175 aa11.67□□□□□ -0.54
APP-208ENST00000439274 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
APP-208ENST00000439274 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
APP-208ENST00000439274 C9orf139Q6ZV77 190 aa11.67□□□□□ -0.54
APP-208ENST00000439274 CEND1Q8N111 149 aa11.67□□□□□ -0.54
APP-208ENST00000439274 PSMG4Q5JS54 123 aa11.66□□□□□ -0.54
APP-208ENST00000439274 C14orf178Q8N769 122 aaPredicted RBP11.66□□□□□ -0.54
APP-208ENST00000439274 PHLDA1Q8WV24 401 aaPredicted RBP11.66□□□□□ -0.54
APP-208ENST00000439274 RASL10AQ92737 203 aa11.66□□□□□ -0.54
APP-208ENST00000439274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.54
APP-208ENST00000439274 C19orf84I3L1E1 186 aa11.65□□□□□ -0.54
APP-208ENST00000439274 GNLYP22749 145 aa11.65□□□□□ -0.54
APP-208ENST00000439274 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
APP-208ENST00000439274 LY6EQ16553 131 aa11.65□□□□□ -0.54
APP-208ENST00000439274 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
APP-208ENST00000439274 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
APP-208ENST00000439274 MRAP2Q96G30 205 aa11.65□□□□□ -0.54
APP-208ENST00000439274 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
APP-208ENST00000439274 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
APP-208ENST00000439274 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.54
APP-208ENST00000439274 LCNL1Q6ZST4 164 aa11.65□□□□□ -0.54
APP-208ENST00000439274 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
APP-208ENST00000439274 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
APP-208ENST00000439274 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
APP-208ENST00000439274 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
APP-208ENST00000439274 AGRNO00468 2067 aa11.64□□□□□ -0.55
APP-208ENST00000439274 G3V4G9 280 aa11.64□□□□□ -0.55
APP-208ENST00000439274 SOCS3O14543 225 aa11.64□□□□□ -0.55
APP-208ENST00000439274 GNRH2O43555 120 aa11.64□□□□□ -0.55
APP-208ENST00000439274 MGPP08493 103 aa11.64□□□□□ -0.55
APP-208ENST00000439274 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
APP-208ENST00000439274 CSTL1Q9H114 145 aa11.64□□□□□ -0.55
APP-208ENST00000439274 LINC00477Q96M19 166 aa11.63□□□□□ -0.55
APP-208ENST00000439274 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
APP-208ENST00000439274 PHLDA3Q9Y5J5 127 aa11.63□□□□□ -0.55
APP-208ENST00000439274 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
APP-208ENST00000439274 IGHV4-39P01824 125 aa11.63□□□□□ -0.55
APP-208ENST00000439274 PLNP26678 52 aa11.63□□□□□ -0.55
APP-208ENST00000439274 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
APP-208ENST00000439274 F8VRH5 84 aa11.62□□□□□ -0.55
APP-208ENST00000439274 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
APP-208ENST00000439274 ASIPP42127 132 aa11.62□□□□□ -0.55
APP-208ENST00000439274 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
APP-208ENST00000439274 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
APP-208ENST00000439274 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
APP-208ENST00000439274 RNF223E7ERA6 249 aa11.62□□□□□ -0.55
APP-208ENST00000439274 H7C1H1 209 aa11.62□□□□□ -0.55
APP-208ENST00000439274 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
APP-208ENST00000439274 SRD5A1P18405 259 aa11.62□□□□□ -0.55
APP-208ENST00000439274 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
APP-208ENST00000439274 CHTOPQ9Y3Y2 248 aaKnown RBP11.62□□□□□ -0.55
APP-208ENST00000439274 NDUFA4O00483 81 aa11.61□□□□□ -0.55
APP-208ENST00000439274 OVOL1O14753 267 aa11.61□□□□□ -0.55
APP-208ENST00000439274 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
APP-208ENST00000439274 EDN2P20800 178 aa11.61□□□□□ -0.55
APP-208ENST00000439274 ORMDL2Q53FV1 153 aa11.61□□□□□ -0.55
APP-208ENST00000439274 Q6ZS46 218 aa11.61□□□□□ -0.55
APP-208ENST00000439274 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
APP-208ENST00000439274 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
APP-208ENST00000439274 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
APP-208ENST00000439274 IGLL5B9A064 214 aa11.6□□□□□ -0.55
APP-208ENST00000439274 CRIP2P52943 208 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms