RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 USP9XQ93008 2570 aaPredicted RBP10.44□□□□□ -0.74
PCNX3-202ENST00000439247 RPL7P18124 248 aaKnown RBP10.44□□□□□ -0.74
PCNX3-202ENST00000439247 CKS1BP61024 79 aa10.44□□□□□ -0.74
PCNX3-202ENST00000439247 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
PCNX3-202ENST00000439247 NCBP2LA6PVI3 153 aaKnown RBP10.43□□□□□ -0.74
PCNX3-202ENST00000439247 ATP5LO75964 103 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 COX8CQ7Z4L0 72 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 SHISA9B4DS77 424 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 CTSGP08311 255 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 OXLD1Q5BKU9 147 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 NRACQ8N912 160 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 PTH2Q96A98 100 aa10.43□□□□□ -0.74
PCNX3-202ENST00000439247 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 MORN3Q6PF18 240 aaPredicted RBP10.42□□□□□ -0.74
PCNX3-202ENST00000439247 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 RAB1BQ9H0U4 201 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 A0A1B0GV72 72 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 NDUFS8O00217 210 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 LAGE3Q14657 143 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 GLMPQ8WWB7 406 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 A0A087WX48 190 aa10.42□□□□□ -0.74
PCNX3-202ENST00000439247 SMCPP49901 116 aaPredicted RBP10.42□□□□□ -0.74
PCNX3-202ENST00000439247 J3QR89 54 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 FHL3Q13643 280 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 APOMO95445 188 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 SCGB1A1P11684 91 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
PCNX3-202ENST00000439247 CRYBG3Q68DQ2 2970 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 AGPAT4-IT1Q9H0P7 198 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 TGFAP01135 160 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
PCNX3-202ENST00000439247 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.75
PCNX3-202ENST00000439247 HLA-DRB4P13762 266 aa10.4□□□□□ -0.75
PCNX3-202ENST00000439247 SRSF1Q07955 248 aaKnown RBP eCLIP10.4□□□□□ -0.75
PCNX3-202ENST00000439247 LINC01559Q495D7 138 aa10.4□□□□□ -0.75
PCNX3-202ENST00000439247 ZNF418Q8TF45 676 aaPredicted RBP10.4□□□□□ -0.75
PCNX3-202ENST00000439247 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.75
PCNX3-202ENST00000439247 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
PCNX3-202ENST00000439247 IGF1P05019 195 aa10.39□□□□□ -0.75
PCNX3-202ENST00000439247 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
PCNX3-202ENST00000439247 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 MYMXA0A1B0GTQ4 84 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 H3BVH4 76 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 LGALS1P09382 135 aaKnown RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 EMP1P54849 157 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 KLHL30-AS1Q8NEE0 82 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 ZNF502Q8TBZ5 544 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 MRPL16Q9NX20 251 aaKnown RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 FBXL19-AS1Q494R0 122 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 PSMB2P49721 201 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
PCNX3-202ENST00000439247 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
PCNX3-202ENST00000439247 DEFB1P60022 68 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 FOXI1Q12951 378 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 CSMD2Q7Z408 3487 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 KMT2BQ9UMN6 2715 aaPredicted RBP10.37□□□□□ -0.75
PCNX3-202ENST00000439247 CRYBA4P53673 196 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 PRR9Q5T870 116 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
PCNX3-202ENST00000439247 F8VRH5 84 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 C19orf84I3L1E1 186 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 TAL2Q16559 108 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 RNF5Q99942 180 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 PLNP26678 52 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
PCNX3-202ENST00000439247 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 ZNF843Q8N446 348 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 NPBQ8NG41 125 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
PCNX3-202ENST00000439247 H7C1H1 209 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 M0R381 172 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 CLEC3BP05452 202 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
PCNX3-202ENST00000439247 UBR5O95071 2799 aaPredicted RBP10.35□□□□□ -0.75
PCNX3-202ENST00000439247 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 BUB3O43684 328 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 GATA3P23771 443 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 XGP55808 180 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms