RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MUC4Q99102 2169 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 IGLV2-18A0A075B6J9 118 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 M0R2N4 97 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 PEX7O00628 323 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 GCGP01275 180 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 FHITP49789 147 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 SLAQ13239 276 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 C8orf49Q96NF6 230 aa17.24■□□□□ 0.35
RAPGEF1-206ENST00000438647 DNAH2Q9P225 4427 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 PFN1P07737 140 aaKnown RBP17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 TPT1P13693 172 aaKnown RBP17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 DPPA3Q6W0C5 159 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 TMUB2Q71RG4 321 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 RASL10AQ92737 203 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 TCEAL7Q9BRU2 100 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 ARL2-SNX15V9GYD0 113 aa17.23■□□□□ 0.35
RAPGEF1-206ENST00000438647 IGHV3-16A0A0C4DH30 117 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 GNRH2O43555 120 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 TYMSP04818 313 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 TCTE3Q8IZS6 198 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 FAM213BQ8TBF2 198 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 NACAE9PAV3 2078 aa17.22■□□□□ 0.35
RAPGEF1-206ENST00000438647 IGHV3-53P01767 116 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 ZNF80P51504 273 aaPredicted RBP17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 LINC00336Q6ZUF6 198 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 SFT2D1Q8WV19 159 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 LINC00479Q96M42 142 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 PRO0255Q9UI72 69 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 LINC00588Q9Y4M8 146 aa17.21■□□□□ 0.35
RAPGEF1-206ENST00000438647 TRAV34A0A0B4J273 112 aa17.2■□□□□ 0.34
RAPGEF1-206ENST00000438647 M0R2P5 195 aa17.2■□□□□ 0.34
RAPGEF1-206ENST00000438647 Q6ZR54 194 aa17.2■□□□□ 0.34
RAPGEF1-206ENST00000438647 MBD3L1Q8WWY6 194 aa17.2■□□□□ 0.34
RAPGEF1-206ENST00000438647 VSIG2Q96IQ7 327 aa17.2■□□□□ 0.34
RAPGEF1-206ENST00000438647 PAX4O43316 350 aa17.19■□□□□ 0.34
RAPGEF1-206ENST00000438647 CST9LP1Q5W188 147 aa17.19■□□□□ 0.34
RAPGEF1-206ENST00000438647 Q6ZNX1 250 aa17.19■□□□□ 0.34
RAPGEF1-206ENST00000438647 ZNRF2Q8NHG8 242 aa17.19■□□□□ 0.34
RAPGEF1-206ENST00000438647 EIF5AL1Q6IS14 154 aaKnown RBP17.18■□□□□ 0.34
RAPGEF1-206ENST00000438647 Q86TA4 180 aa17.18■□□□□ 0.34
RAPGEF1-206ENST00000438647 HHLA3Q9XRX5 114 aa17.18■□□□□ 0.34
RAPGEF1-206ENST00000438647 TRGV4A0A0C4DH28 118 aa17.17■□□□□ 0.34
RAPGEF1-206ENST00000438647 FHL2Q14192 279 aa17.17■□□□□ 0.34
RAPGEF1-206ENST00000438647 SOHLH1Q5JUK2 328 aa17.17■□□□□ 0.34
RAPGEF1-206ENST00000438647 FMC1Q96HJ9 113 aa17.17■□□□□ 0.34
RAPGEF1-206ENST00000438647 A0A096LPF7 62 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 H2AFB1P0C5Y9 115 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 UBE2G1P62253 170 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 LGALSLQ3ZCW2 172 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 C11orf21Q9P2W6 132 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 ZFP30Q9Y2G7 519 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 ICOSQ9Y6W8 199 aa17.16■□□□□ 0.34
RAPGEF1-206ENST00000438647 TRAV4A0A0B4J268 109 aa17.15■□□□□ 0.34
RAPGEF1-206ENST00000438647 CRYBA4P53673 196 aa17.15■□□□□ 0.34
RAPGEF1-206ENST00000438647 HECTD4Q9Y4D8 3996 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 FABP5P3A8MUU1 101 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 PAGE4O60829 102 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 C1QBP02746 253 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 SFTA3P0C7M3 94 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 ESRGQ1W209 222 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 OR4C5Q8NGB2 326 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 ZNF479Q96JC4 524 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 FAT2Q9NYQ8 4349 aa17.14■□□□□ 0.33
RAPGEF1-206ENST00000438647 DNAH17Q9UFH2 4485 aa17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 NBDYA0A0U1RRE5 68 aa17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 A0A1B0GV50 99 aa17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 RAB5CP51148 216 aa17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 UPK3BQ9BT76 320 aa17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 MRPS16Q9Y3D3 137 aaKnown RBP17.13■□□□□ 0.33
RAPGEF1-206ENST00000438647 TRBV6-1A0A0K0K1D8 114 aa17.12■□□□□ 0.33
RAPGEF1-206ENST00000438647 AKR1C3P42330 323 aa17.12■□□□□ 0.33
RAPGEF1-206ENST00000438647 MRPL23Q16540 153 aaKnown RBP17.12■□□□□ 0.33
RAPGEF1-206ENST00000438647 C1orf134Q5TEV5 83 aa17.12■□□□□ 0.33
RAPGEF1-206ENST00000438647 Q9H8V8 135 aa17.12■□□□□ 0.33
RAPGEF1-206ENST00000438647 RTL8CO15255 209 aa17.11■□□□□ 0.33
RAPGEF1-206ENST00000438647 ZNF876PQ49A33 203 aa17.11■□□□□ 0.33
RAPGEF1-206ENST00000438647 COX8CQ7Z4L0 72 aa17.11■□□□□ 0.33
RAPGEF1-206ENST00000438647 C9JCJ5 164 aa17.1■□□□□ 0.33
RAPGEF1-206ENST00000438647 AKAP14Q86UN6 197 aa17.1■□□□□ 0.33
RAPGEF1-206ENST00000438647 PCNPQ8WW12 178 aaKnown RBP17.1■□□□□ 0.33
RAPGEF1-206ENST00000438647 C9orf85Q96MD7 179 aa17.1■□□□□ 0.33
RAPGEF1-206ENST00000438647 IGKV3D-20A0A0C4DH25 116 aa17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 TEX46H3BTG2 121 aa17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 ORM1P02763 201 aa17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 S100A9P06702 114 aaKnown RBP17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 S100A4P26447 101 aaKnown RBP17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 SLC51BQ86UW2 128 aa17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 ZC2HC1AQ96GY0 325 aa17.09■□□□□ 0.33
RAPGEF1-206ENST00000438647 PRSS29PA6NIE9 313 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 CIDEAO60543 219 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 LTAP01374 205 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 TTC32Q5I0X7 151 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 FAM162BQ5T6X4 162 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 PTH2Q96A98 100 aa17.08■□□□□ 0.32
RAPGEF1-206ENST00000438647 B4DEV8 164 aa17.07■□□□□ 0.32
RAPGEF1-206ENST00000438647 RNASE3P12724 160 aaKnown RBP17.07■□□□□ 0.32
RAPGEF1-206ENST00000438647 ASIPP42127 132 aa17.07■□□□□ 0.32
RAPGEF1-206ENST00000438647 NEGR1Q7Z3B1 354 aa17.07■□□□□ 0.32
RAPGEF1-206ENST00000438647 MANBALQ9NQG1 85 aa17.07■□□□□ 0.32
RAPGEF1-206ENST00000438647 hCG_2014768A0A024R1R8 64 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms