RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
UBXN1-203ENST00000436354 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
UBXN1-203ENST00000436354 APOBP04114 4563 aaKnown RBP12.73□□□□□ -0.37
UBXN1-203ENST00000436354 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
UBXN1-203ENST00000436354 MEF2BQ02080 365 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-203ENST00000436354 OR5I1Q13606 314 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 ZNF506Q5JVG8 444 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 CLLU1Q5K131 121 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 C11orf52Q96A22 123 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 FAM210AQ96ND0 272 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 UPK3BQ9BT76 320 aa12.72□□□□□ -0.37
UBXN1-203ENST00000436354 TRAV26-1A0A087WT03 109 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.37
UBXN1-203ENST00000436354 IGLV2-11P01706 119 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 CT45A10P0DMU9 189 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 ERCC8Q13216 396 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
UBXN1-203ENST00000436354 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.37
UBXN1-203ENST00000436354 RBFOX3A6NFN3 312 aa12.7□□□□□ -0.38
UBXN1-203ENST00000436354 F6UZH7 168 aa12.7□□□□□ -0.38
UBXN1-203ENST00000436354 K7EQM0 130 aa12.7□□□□□ -0.38
UBXN1-203ENST00000436354 RAB14P61106 215 aa12.7□□□□□ -0.38
UBXN1-203ENST00000436354 TMEM263Q8WUH6 116 aaKnown RBP12.7□□□□□ -0.38
UBXN1-203ENST00000436354 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
UBXN1-203ENST00000436354 TRBV6-1A0A0K0K1D8 114 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 PDE6DO43924 150 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 CRISP2P16562 243 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 ZNF138P52744 262 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
UBXN1-203ENST00000436354 DNAH5Q8TE73 4624 aa12.69□□□□□ -0.38
UBXN1-203ENST00000436354 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
UBXN1-203ENST00000436354 INAFM2P0DMQ5 153 aa12.68□□□□□ -0.38
UBXN1-203ENST00000436354 CDKN1BP46527 198 aa12.68□□□□□ -0.38
UBXN1-203ENST00000436354 ESRGQ1W209 222 aa12.68□□□□□ -0.38
UBXN1-203ENST00000436354 MRPS16Q9Y3D3 137 aaKnown RBP12.68□□□□□ -0.38
UBXN1-203ENST00000436354 A0A0J9YY99 117 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 KLLNB2CW77 178 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 H3BNG1 76 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 H7BYZ3 331 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 LEPP41159 167 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 TOR2AQ5JU69 321 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 Q8TAT8 98 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 LINC00479Q96M42 142 aa12.67□□□□□ -0.38
UBXN1-203ENST00000436354 S100A9P06702 114 aaKnown RBP12.66□□□□□ -0.38
UBXN1-203ENST00000436354 AKR1C3P42330 323 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 FLI1Q01543 452 aaPredicted RBP12.66□□□□□ -0.38
UBXN1-203ENST00000436354 TMEM183BQ1AE95 376 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 Q86TA4 180 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 C20orf144Q9BQM9 153 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
UBXN1-203ENST00000436354 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
UBXN1-203ENST00000436354 HOXA5P20719 270 aa12.65□□□□□ -0.38
UBXN1-203ENST00000436354 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
UBXN1-203ENST00000436354 HERC1Q15751 4861 aa12.65□□□□□ -0.38
UBXN1-203ENST00000436354 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 LTAP01374 205 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 LINC00315P59091 139 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 SGK494Q96LW2 274 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 EIF5A2Q9GZV4 153 aaKnown RBP12.64□□□□□ -0.39
UBXN1-203ENST00000436354 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
UBXN1-203ENST00000436354 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GAGE12BA1L429 117 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 EREGO14944 169 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GAGE7O76087 117 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 KIR3DS1Q14943 382 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 PRR9Q5T870 116 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
UBXN1-203ENST00000436354 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
UBXN1-203ENST00000436354 UBE2G1P62253 170 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 SAPCD1Q5SSQ6 148 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
UBXN1-203ENST00000436354 C7orf71A4D174 169 aa12.61□□□□□ -0.39
UBXN1-203ENST00000436354 SRP19P09132 144 aaKnown RBP12.61□□□□□ -0.39
UBXN1-203ENST00000436354 XGP55808 180 aa12.61□□□□□ -0.39
UBXN1-203ENST00000436354 Q6AWC8 147 aa12.61□□□□□ -0.39
UBXN1-203ENST00000436354 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
UBXN1-203ENST00000436354 Q6ZRN7 208 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-203ENST00000436354 FRZBQ92765 325 aa12.61□□□□□ -0.39
UBXN1-203ENST00000436354 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms