RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 C1QBP02746 253 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 HOXA5P20719 270 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 FAM3BP58499 235 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-207ENST00000435455 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 TCEAL7Q9BRU2 100 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
SMPD4-207ENST00000435455 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
SMPD4-207ENST00000435455 H3BNG1 76 aa11.37□□□□□ -0.59
SMPD4-207ENST00000435455 GCGP01275 180 aa11.37□□□□□ -0.59
SMPD4-207ENST00000435455 LGALSLQ3ZCW2 172 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-207ENST00000435455 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
SMPD4-207ENST00000435455 EIF5AL1Q6IS14 154 aaKnown RBP11.37□□□□□ -0.59
SMPD4-207ENST00000435455 TRAV34A0A0B4J273 112 aa11.36□□□□□ -0.59
SMPD4-207ENST00000435455 PFN1P07737 140 aaKnown RBP11.36□□□□□ -0.59
SMPD4-207ENST00000435455 AKAP14Q86UN6 197 aa11.36□□□□□ -0.59
SMPD4-207ENST00000435455 LINC00479Q96M42 142 aa11.36□□□□□ -0.59
SMPD4-207ENST00000435455 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 A0A0J9YY99 117 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 GNRH2O43555 120 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-207ENST00000435455 CCL18P55774 89 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 Q86TA4 180 aa11.35□□□□□ -0.59
SMPD4-207ENST00000435455 hCG_2014768A0A024R1R8 64 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 PAGE4O60829 102 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 TYMSP04818 313 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 RAB5CP51148 216 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 UBE2G1P62253 170 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 SLAQ13239 276 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 RASL10AQ92737 203 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 FMC1Q96HJ9 113 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 ZFP30Q9Y2G7 519 aa11.34□□□□□ -0.59
SMPD4-207ENST00000435455 M0R2P5 195 aa11.33□□□□□ -0.6
SMPD4-207ENST00000435455 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
SMPD4-207ENST00000435455 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
SMPD4-207ENST00000435455 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 A0A1B0GV50 99 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 PAX4O43316 350 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 SLC51BQ86UW2 128 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 PRO0255Q9UI72 69 aa11.32□□□□□ -0.6
SMPD4-207ENST00000435455 EPPK1P58107 5090 aaKnown RBP11.32□□□□□ -0.6
SMPD4-207ENST00000435455 TEX46H3BTG2 121 aa11.31□□□□□ -0.6
SMPD4-207ENST00000435455 AKR1C3P42330 323 aa11.31□□□□□ -0.6
SMPD4-207ENST00000435455 COX8CQ7Z4L0 72 aa11.31□□□□□ -0.6
SMPD4-207ENST00000435455 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
SMPD4-207ENST00000435455 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
SMPD4-207ENST00000435455 IGLV2-18A0A075B6J9 118 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 TRAV1-1A0A0B4J248 108 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 M0R2N4 97 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 S100A9P06702 114 aaKnown RBP11.3□□□□□ -0.6
SMPD4-207ENST00000435455 SULT1A2P50226 295 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 FHL2Q14192 279 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 MANBALQ9NQG1 85 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
SMPD4-207ENST00000435455 FRAS1Q86XX4 4008 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 Q6ZR54 194 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 OR4C5Q8NGB2 326 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 ZNF479Q96JC4 524 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 ICOSQ9Y6W8 199 aa11.29□□□□□ -0.6
SMPD4-207ENST00000435455 A0A096LPF7 62 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 LTAP01374 205 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 SFTA3P0C7M3 94 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 CRYBA4P53673 196 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 ZNRF2Q8NHG8 242 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 PTH2Q96A98 100 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
SMPD4-207ENST00000435455 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 ORM1P02763 201 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
SMPD4-207ENST00000435455 LINC00336Q6ZUF6 198 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 C9orf62Q8N4C0 152 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
SMPD4-207ENST00000435455 B4DEV8 164 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 C9JCJ5 164 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 CIDEAO60543 219 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 ASIPP42127 132 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 CCL20P78556 96 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
SMPD4-207ENST00000435455 ESRGQ1W209 222 aa11.26□□□□□ -0.61
SMPD4-207ENST00000435455 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
SMPD4-207ENST00000435455 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 SH2D1AO60880 128 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
SMPD4-207ENST00000435455 CRIP1P50238 77 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 ZNF674Q2M3X9 581 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 SOHLH1Q5JUK2 328 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
SMPD4-207ENST00000435455 NBDYA0A0U1RRE5 68 aa11.24□□□□□ -0.61
SMPD4-207ENST00000435455 KRBOX1C9JBD0 128 aa11.24□□□□□ -0.61
SMPD4-207ENST00000435455 IFNA1P01562 189 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms