RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 Q6ZQT7 251 aa12.63□□□□□ -0.39
LIMK1-203ENST00000435201 MYOZ3Q8TDC0 251 aa12.62□□□□□ -0.39
LIMK1-203ENST00000435201 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
LIMK1-203ENST00000435201 ZNF702PQ9H963 129 aa12.62□□□□□ -0.39
LIMK1-203ENST00000435201 PRRC2AP48634 2157 aaKnown RBP12.62□□□□□ -0.39
LIMK1-203ENST00000435201 J3KRW8 73 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
LIMK1-203ENST00000435201 MED14OSP0DP75 135 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 EVI2AP22794 236 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 F6UB75 175 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
LIMK1-203ENST00000435201 ASIPP42127 132 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 DEFB1P60022 68 aa12.61□□□□□ -0.39
LIMK1-203ENST00000435201 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-203ENST00000435201 EDN2P20800 178 aa12.6□□□□□ -0.39
LIMK1-203ENST00000435201 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
LIMK1-203ENST00000435201 Q96MF0 132 aa12.6□□□□□ -0.39
LIMK1-203ENST00000435201 LGALS9O00182 355 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 SRD5A1P18405 259 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 BATFQ16520 125 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 LGALS9BQ3B8N2 356 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 OR2K2Q8NGT1 345 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 CSMD2Q7Z408 3487 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 PRSS47A8MTI9 375 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 GAS8-AS1O95177 125 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 S100A4P26447 101 aaKnown RBP12.59□□□□□ -0.39
LIMK1-203ENST00000435201 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 Q8N8P6 123 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 MRAP2Q96G30 205 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
LIMK1-203ENST00000435201 POLQO75417 2590 aa12.59□□□□□ -0.39
LIMK1-203ENST00000435201 IFI27L1Q96BM0 104 aa12.58□□□□□ -0.4
LIMK1-203ENST00000435201 KLLNB2CW77 178 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 TCAPO15273 167 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 FCER1GP30273 86 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 GOLT1BQ9Y3E0 138 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-203ENST00000435201 SLC25A34Q6PIV7 304 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 NRACQ8N912 160 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 ODF3Q96PU9 254 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 PMCHL2Q9BQD1 86 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 PHLDA3Q9Y5J5 127 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
LIMK1-203ENST00000435201 PTPN13Q12923 2485 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 A0A087WW49 117 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 LEPP41159 167 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 FXYD7P58549 80 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
LIMK1-203ENST00000435201 KRTAP1-3Q8IUG1 177 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 DPF1Q92782 380 aa12.56□□□□□ -0.4
LIMK1-203ENST00000435201 IGLV2-18A0A075B6J9 118 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 SYNJ2BPP57105 145 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 Q8N2B8 174 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 M0R381 172 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 TEX29Q8N6K0 151 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
LIMK1-203ENST00000435201 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
LIMK1-203ENST00000435201 CENPEQ02224 2701 aa12.54□□□□□ -0.4
LIMK1-203ENST00000435201 K7EQG2 157 aa12.54□□□□□ -0.4
LIMK1-203ENST00000435201 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-203ENST00000435201 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
LIMK1-203ENST00000435201 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 PSMG4Q5JS54 123 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 ZNF688P0C7X2 276 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 RNASE3P12724 160 aaKnown RBP12.53□□□□□ -0.4
LIMK1-203ENST00000435201 TFPI2P48307 235 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 FAM159AQ6UWV7 190 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
LIMK1-203ENST00000435201 ZANQ9Y493 2812 aa12.52□□□□□ -0.4
LIMK1-203ENST00000435201 A0A0J9YX75 114 aa12.52□□□□□ -0.41
LIMK1-203ENST00000435201 GNRH2O43555 120 aa12.52□□□□□ -0.41
LIMK1-203ENST00000435201 NXPH4O95158 308 aa12.52□□□□□ -0.41
LIMK1-203ENST00000435201 LAGE3Q14657 143 aa12.52□□□□□ -0.41
LIMK1-203ENST00000435201 TMEM158Q8WZ71 300 aa12.52□□□□□ -0.41
LIMK1-203ENST00000435201 C7orf71A4D174 169 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 COX8AP10176 69 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 HINT1P49773 126 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-203ENST00000435201 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 STPG4Q8N801 248 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 C18orf15Q96N68 181 aa12.51□□□□□ -0.41
LIMK1-203ENST00000435201 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
LIMK1-203ENST00000435201 CD5LO43866 347 aa12.5□□□□□ -0.41
LIMK1-203ENST00000435201 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
LIMK1-203ENST00000435201 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-203ENST00000435201 C20orf78Q9BR46 151 aa12.5□□□□□ -0.41
LIMK1-203ENST00000435201 SMIM2Q9BVW6 85 aa12.5□□□□□ -0.41
LIMK1-203ENST00000435201 ATP5LO75964 103 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms