RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 J3QLI3 93 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 Q6ZQT7 251 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 BSNQ9UPA5 3926 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 KLHL30-AS1Q8NEE0 82 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 NPYP01303 97 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 C14orf178Q8N769 122 aaPredicted RBP9.31□□□□□ -0.92
CLDN4-203ENST00000435050 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
CLDN4-203ENST00000435050 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
CLDN4-203ENST00000435050 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
CLDN4-203ENST00000435050 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
CLDN4-203ENST00000435050 CHTOPQ9Y3Y2 248 aaKnown RBP9.3□□□□□ -0.92
CLDN4-203ENST00000435050 J3QKU1 62 aa9.3□□□□□ -0.92
CLDN4-203ENST00000435050 NMUP48645 174 aa9.3□□□□□ -0.92
CLDN4-203ENST00000435050 LEPP41159 167 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 ANXA2RQ3ZCQ2 193 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 EREGO14944 169 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 C20orf173Q96LM9 149 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 NUDT3O95989 172 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 CACNG7P62955 275 aa9.29□□□□□ -0.92
CLDN4-203ENST00000435050 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 GNRH2O43555 120 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
CLDN4-203ENST00000435050 SLURP1P55000 103 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 OR11H1Q8NG94 326 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 SIGLEC8Q9NYZ4 499 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 CSMD1Q96PZ7 3565 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 IGHV4OR15-8A0A075B7B6 117 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 A0A087WW49 117 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 TRAV8-2A0A0B4J237 113 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 TCTEX1D4Q5JR98 221 aa9.28□□□□□ -0.92
CLDN4-203ENST00000435050 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.92
CLDN4-203ENST00000435050 H3BUA1 57 aa9.27□□□□□ -0.92
CLDN4-203ENST00000435050 K7ERU9 68 aa9.27□□□□□ -0.92
CLDN4-203ENST00000435050 KLK9Q9UKQ9 250 aa9.27□□□□□ -0.92
CLDN4-203ENST00000435050 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-203ENST00000435050 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 C7orf71A4D174 169 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 HBDP02042 147 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 DEFB131AP59861 70 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 ZNF56Q15929 161 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 A0A087WWL8 130 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 FCER1GP30273 86 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.93
CLDN4-203ENST00000435050 CLUHP3Q96NS8 147 aa9.27□□□□□ -0.93
CLDN4-203ENST00000435050 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
CLDN4-203ENST00000435050 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
CLDN4-203ENST00000435050 SVEP1Q4LDE5 3571 aa9.26□□□□□ -0.93
CLDN4-203ENST00000435050 MS4A6AQ9H2W1 248 aa9.26□□□□□ -0.93
CLDN4-203ENST00000435050 FLNAP21333 2647 aaKnown RBP9.25□□□□□ -0.93
CLDN4-203ENST00000435050 A0A087X0K7 114 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 FOXC2Q99958 501 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 TRBV6-1A0A0K0K1D8 114 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 SRSF1Q07955 248 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDN4-203ENST00000435050 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 ZANQ9Y493 2812 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 A0A1B0GV72 72 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 IGHG4P01861 327 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 DNLZQ5SXM8 178 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 ERASQ7Z444 233 aa9.25□□□□□ -0.93
CLDN4-203ENST00000435050 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 TEX43Q6ZNM6 134 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 GTF2H5Q6ZYL4 71 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 C11orf21Q9P2W6 132 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 ESDP10768 282 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 TSPOP30536 169 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 SNHG12Q9BXW3 62 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 ZNF256Q9Y2P7 627 aaPredicted RBP9.24□□□□□ -0.93
CLDN4-203ENST00000435050 HELZ2Q9BYK8 2649 aaKnown RBP9.24□□□□□ -0.93
CLDN4-203ENST00000435050 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 PPBPP02775 128 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 ELANEP08246 267 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 IGLL1P15814 213 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
CLDN4-203ENST00000435050 LGALS1P09382 135 aaKnown RBP9.23□□□□□ -0.93
CLDN4-203ENST00000435050 NSUN5P1Q3KNT7 163 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 OR2K2Q8NGT1 345 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 TMEM158Q8WZ71 300 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 OR1N2Q8NGR9 330 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 PRR9Q5T870 116 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 STPG4Q8N801 248 aa9.23□□□□□ -0.93
CLDN4-203ENST00000435050 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms