RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 RAX2Q96IS3 184 aa9.52□□□□□ -0.89
SEMA3F-206ENST00000434342 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
SEMA3F-206ENST00000434342 ZNF785A8K8V0 405 aa9.52□□□□□ -0.89
SEMA3F-206ENST00000434342 C21orf62Q9NYP8 219 aa9.52□□□□□ -0.89
SEMA3F-206ENST00000434342 VMO1Q7Z5L0 202 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 IGKV2-40A0A087WW87 121 aaPredicted RBP9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 SNCGO76070 127 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 IGKV2D-40P01614 121 aaPredicted RBP9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 CSDC2Q9Y534 153 aaKnown RBP9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 SOX21Q9Y651 276 aaPredicted RBP9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 A0A096LNJ9 63 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 CRIP1P50238 77 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 ZFP2Q6ZN57 461 aa9.51□□□□□ -0.89
SEMA3F-206ENST00000434342 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 SPXQ9BT56 116 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 ZFP36P26651 326 aaKnown RBP9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 RIGQ13278 110 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 Q8TAT8 98 aa9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 HRNRQ86YZ3 2850 aaPredicted RBP9.5□□□□□ -0.89
SEMA3F-206ENST00000434342 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 PRSS1P07477 247 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 IFITM1P13164 125 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 KLRB1Q12918 225 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 ECSCRQ19T08 205 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 NPBQ8NG41 125 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 IFI27L1Q96BM0 104 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 NDUFA3O95167 84 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 IGLV11-55A0A075B6I3 123 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 HAX1O00165 279 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 TMEM75Q8N9X5 138 aa9.49□□□□□ -0.89
SEMA3F-206ENST00000434342 FASNP49327 2511 aaKnown RBP9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 M0R1W7 72 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 WI2-2373I1.2A0A1W2PRP0 233 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 TMEM213A2RRL7 107 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 LGALS9BQ3B8N2 356 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 LGALS9CQ6DKI2 356 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 TMEM160Q9NX00 188 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 FAM208BQ5VWN6 2430 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■□□□ 12.9
SEMA3F-206ENST00000434342 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
SEMA3F-206ENST00000434342 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 A0A1W2PPR1 153 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 MAPKAPK5-AS1Q8N8E1 139 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 D6R8Y8 96 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 MRPS12O15235 138 aaKnown RBP9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 VCX2Q9H322 139 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 RHODO00212 210 aa9.47□□□□□ -0.89
SEMA3F-206ENST00000434342 CTSGP08311 255 aa9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 ZNF688P0C7X2 276 aa9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 LINC00694P0DN24 101 aa9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 LY6DQ14210 128 aa9.46□□□□□ -0.89
SEMA3F-206ENST00000434342 SH2D1AO60880 128 aa9.46□□□□□ -0.9
SEMA3F-206ENST00000434342 AMN1Q8IY45 258 aa9.46□□□□□ -0.9
SEMA3F-206ENST00000434342 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 ORM1P02763 201 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 ANKRD29Q8N6D5 301 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
SEMA3F-206ENST00000434342 G3V318 75 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 PDE6HQ13956 83 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 TWIST1Q15672 202 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 FOXC2Q99958 501 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 HBDP02042 147 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 ERCC8Q13216 396 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
SEMA3F-206ENST00000434342 EGR2P11161 476 aaPredicted RBP9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 Q8N9W7 124 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 PRR25Q96S07 402 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 LINC00527Q9UJ94 153 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 OVOL3O00110 214 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 UCNP55089 124 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 ATP6V0E1O15342 81 aa9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 HOXA3O43365 443 aaPredicted RBP9.43□□□□□ -0.9
SEMA3F-206ENST00000434342 SAA4P35542 130 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms