RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TEN1Q86WV5 123 aa8.9□□□□□ -0.99
HMGCS1-202ENST00000433297 RAX2Q96IS3 184 aa8.9□□□□□ -0.99
HMGCS1-202ENST00000433297 AGPAT4-IT1Q9H0P7 198 aa8.9□□□□□ -0.99
HMGCS1-202ENST00000433297 COL27A1Q8IZC6 1860 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 ZNF883P0CG24 379 aa8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 TNFRSF13BO14836 293 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 SMIM2Q9BVW6 85 aa8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 ATP6V0E2Q8NHE4 81 aa8.89□□□□□ -0.99
HMGCS1-202ENST00000433297 TRAV8-2A0A0B4J237 113 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 CTSGP08311 255 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 C14orf178Q8N769 122 aaPredicted RBP8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 C2orf66Q6UXQ4 117 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 IGLV11-55A0A075B6I3 123 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 NDPQ00604 133 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 TMEM190Q8WZ59 177 aa8.88□□□□□ -0.99
HMGCS1-202ENST00000433297 GAGE5Q13069 117 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 GAGE6Q13070 117 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 BAALCQ8WXS3 180 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 KAAG1Q9UBP8 84 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 ABCA4P78363 2273 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 SUMO2P61956 95 aaKnown RBP8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
HMGCS1-202ENST00000433297 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 ORMDL2Q53FV1 153 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 LYRM7Q5U5X0 104 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 NDUFA11Q86Y39 141 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 PIEZO2Q9H5I5 2752 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 APC2O95996 2303 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 C9JAW5 83 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 CLEC3BP05452 202 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 IGFL2Q6UWQ7 119 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 OR11H6Q8NGC7 330 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 RASL10AQ92737 203 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 DPM3Q9P2X0 92 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 LY6HO94772 140 aa8.86□□□□□ -0.99
HMGCS1-202ENST00000433297 SCGB2A1O75556 95 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 UBE2D1P51668 147 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 ECSCRQ19T08 205 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 Q6ZS46 218 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 C1orf122Q6ZSJ8 110 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 BEX4Q9NWD9 120 aaPredicted RBP8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 IGF1P05019 195 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 TOMM6Q96B49 74 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 RNF5Q99942 180 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
HMGCS1-202ENST00000433297 E7EQL1 145 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 SNCGO76070 127 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 CRIP2P52943 208 aaPredicted RBP8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 UBE2D3P61077 147 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 UBE2D2P62837 147 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 SRSF2Q01130 221 aaKnown RBP8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 A0A0G2JNJ9 132 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 CD7P09564 240 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 CFC1P0CG37 223 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 Q1RN00 199 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 C15orf32Q32M92 178 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 TTC32Q5I0X7 151 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 Q9UFV3 132 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 LRBAP50851 2863 aa8.84□□□□□ -0.99
HMGCS1-202ENST00000433297 SLC25A20O43772 301 aa8.84□□□□□ -1
HMGCS1-202ENST00000433297 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -1
HMGCS1-202ENST00000433297 C11orf86A6NJI1 115 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 DEFB1P60022 68 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 CLEC19AQ6UXS0 136 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 BUB3O43684 328 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 SLC50A1Q9BRV3 221 aa8.83□□□□□ -1
HMGCS1-202ENST00000433297 IGKV3-7A0A075B6H7 116 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 TMEM262E9PQX1 116 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 LY6LH3BQJ8 138 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 IGHV4-39P01824 125 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 HERVK_113P61574 105 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 Q6ZS92 163 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 AJUBAQ96IF1 538 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 MSRB2Q9Y3D2 182 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 A0A0J9YY99 117 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 LINC01619G3V211 115 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 ZNF672Q499Z4 452 aaPredicted RBP8.82□□□□□ -1
HMGCS1-202ENST00000433297 C16orf92Q96LL3 132 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 PSMG3-AS1Q96PY0 264 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 PRO1854Q9UHT4 67 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 SPTBN1Q01082 2364 aaKnown RBP8.82□□□□□ -1
HMGCS1-202ENST00000433297 CRLF1O75462 422 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms