RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SPCS1Q9Y6A9 102 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 ITSN1Q15811 1721 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 UBR1Q8IWV7 1749 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 SHANK3Q9BYB0 1731 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 MUC4Q99102 2169 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3-49A0A0A0MS15 119 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 TMEM235A6NFC5 223 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 NUPR1O60356 82 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 CREBL2O60519 120 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 ABCA8O94911 1581 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 APCSP02743 223 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 IL4P05112 153 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 NFYAP23511 347 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 FAUP35544 74 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 HIST1H4AP62805 103 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 SUPT4H1P63272 117 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 KIF14Q15058 1648 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 ADIRFQ15847 76 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 FAM78AQ5JUQ0 283 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 ZNF660Q6AZW8 331 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 DPPA3Q6W0C5 159 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 HEPN1Q6WQI6 88 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 FAM216BQ8N7L0 139 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 Q8N8P6 123 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 RAPGEF6Q8TEU7 1601 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SCGB3A1Q96QR1 104 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 NABP2Q9BQ15 211 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 ST20Q9HBF5 79 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 BTAF1O14981 1849 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 USP54Q70EL1 1684 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SCAF11Q99590 1463 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 C10orf71Q711Q0 1435 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 IGLV1-50A0A075B6I6 118 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 A0A1B0GW54 56 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 B4DSR2 109 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 ZNF736B4DX44 427 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 LECT2O14960 151 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 LY6HO94772 140 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 PROSCO94903 275 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 IL5P05113 134 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 DEFA4P12838 97 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 CCL4P13236 92 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SLC25A16P16260 332 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 PEBP1P30086 187 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 ASIPP42127 132 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 POLR2JP52435 117 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 RBM3P98179 157 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 ZNF816Q0VGE8 651 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 ETDBQ3ZM63 59 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 BVES-AS1Q5T3Y7 98 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 C16orf47Q6ZP98 133 aaPredicted RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 Q6ZQT7 251 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 SLC25A26Q70HW3 274 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 CNEP1R1Q8N9A8 125 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 OR2T35Q8NGX2 323 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 OR10AG1Q8NH19 301 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 VSTM2AQ8TAG5 236 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 AQP3Q92482 292 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 POP5Q969H6 163 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 CHCHD1Q96BP2 118 aaKnown RBP1.55□□□□□ -2.16
CLK1-204ENST00000432425 RETNLBQ9BQ08 111 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 UPK3BQ9BT76 320 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 LINC00574Q9H8X3 128 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 TMEM242Q9NWH2 141 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 TAS2R4Q9NYW5 299 aa1.55□□□□□ -2.16
CLK1-204ENST00000432425 MALRD1Q5VYJ5 2156 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 PCNX2A6NKB5 2137 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 PLXNA1Q9UIW2 1896 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 RGPD2P0DJD1 1756 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 COL5A3P25940 1745 aaPredicted RBP1.54□□□□□ -2.16
CLK1-204ENST00000432425 COL24A1Q17RW2 1714 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 TRPM3Q9HCF6 1732 aaPredicted RBP1.54□□□□□ -2.16
CLK1-204ENST00000432425 ITSN2Q9NZM3 1697 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 ADGRL1O94910 1474 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 FANCD2Q9BXW9 1451 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3-21A0A0B4J1V1 117 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 A0A1W2PPM0 123 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 H3BRM9 83 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 K7ERS5 55 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 SDCBPO00560 298 aaPredicted RBP1.54□□□□□ -2.16
CLK1-204ENST00000432425 SLC25A20O43772 301 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 SSSCA1O60232 199 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 IGKCP01834 107 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 GYPAP02724 150 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3-30-3P0DP02 117 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 CKS2P33552 79 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 SSR2P43308 183 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 LGALSLQ3ZCW2 172 aaPredicted RBP1.54□□□□□ -2.16
CLK1-204ENST00000432425 FAM229BQ4G0N7 80 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 PFN4Q8NHR9 129 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 CCL4L1Q8NHW4 92 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 CYSTM1Q9H1C7 97 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 OR5V1Q9UGF6 321 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 S4R3C0 116 aa1.54□□□□□ -2.16
CLK1-204ENST00000432425 U3KQK5 164 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms